Click here to switch to the map view.

The map label for this gene is yozG [H]

Identifier: 59713237

GI number: 59713237

Start: 58085

End: 58294

Strand: Reverse

Name: yozG [H]

Synonym: VF_A0054

Alternate gene names: 59713237

Gene position: 58294-58085 (Counterclockwise)

Preceding gene: 59713238

Following gene: 59713235

Centisome position: 4.38

GC content: 36.67

Gene sequence:

>210_bases
ATGCCTATCGTTGTAAATCTCGATATCATGCTAGCCAAGCGGAAAATGCGCTCAAATCAGTTGGCTCAATTAATTGGTAT
CACGGAACAGAATTTATCTGTACTAAAAAATAGCAGAGCAAAGGCAATAAAGTTCTCAACCTTAGAAGCCATTTGCAAAC
ATTTAGAATGCCAACCTGCGGATATTTTAGAATATCAAGCAGAAGAATAA

Upstream 100 bases:

>100_bases
TGTTAGTTATTGGTTTAATCGTACGAGTTATCGCAAAAGTAATGGAAGAAGCAAGCCTTATTCGTGAAGAACAAGAACTC
ACAATCTAGAGACAATATAT

Downstream 100 bases:

>100_bases
GACTATCCAACAATAAAACGCCATGATTCACTCAAGTGTGCTTCATGGCGATTGTAATTATGTTTAAGTAAATAAAGAAT
CTGAATACTGTTTCACAAAA

Product: Cro/Cl family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MPIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEAICKHLECQPADILEYQAEE

Sequences:

>Translated_69_residues
MPIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEAICKHLECQPADILEYQAEE
>Mature_68_residues
PIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEAICKHLECQPADILEYQAEE

Specific function: Unknown

COG id: COG3655

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7812; Mature: 7681

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEAICKHLECQPA
CCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCC
DILEYQAEE
HHHHCCCCC
>Mature Secondary Structure 
PIVVNLDIMLAKRKMRSNQLAQLIGITEQNLSVLKNSRAKAIKFSTLEAICKHLECQPA
CEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCC
DILEYQAEE
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]