Click here to switch to the map view.

The map label for this gene is 172087816

Identifier: 172087816

GI number: 172087816

Start: 930385

End: 930618

Strand: Reverse

Name: 172087816

Synonym: VF_A1190

Alternate gene names: NA

Gene position: 930618-930385 (Counterclockwise)

Preceding gene: 59714011

Following gene: 59714010

Centisome position: 69.95

GC content: 37.18

Gene sequence:

>234_bases
ATGAGTATGACTCATAAATGGTCAATTAAAAATTGTCCCAAGGATATAGAGAGCCAAGTTTTATCTGTTATTGGATTAAT
CGATAAGAAAGGTTCAGCTTCAGACATGGATCTCTGCAAGATCTTTGGTGAAGTGTTATGGAGTGACGGGAAATATTTTA
ACTCGCACGCGTTTCGTTTCTTGTTTGATCATGAGACTCTTTCATGTGAAGTAACGAAGAGACACTTGCACTAA

Upstream 100 bases:

>100_bases
ACAAAAAAGCTTGATTTAAGTTATCATTGGGTTAAACTGTGTTTTGTGACTTGAGCACAATAAATAAAAACACATTAGGC
TAGTTATTATTATGGAAAAA

Downstream 100 bases:

>100_bases
AGAAAACCAGCTATGTATTTTTAAGGCCATTATCATTCCCCCTATAATGGCCTTTTTTATTGCCTATAGAACCGCAATTA
TCTCAACTCTCTTCTAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSMTHKWSIKNCPKDIESQVLSVIGLIDKKGSASDMDLCKIFGEVLWSDGKYFNSHAFRFLFDHETLSCEVTKRHLH

Sequences:

>Translated_77_residues
MSMTHKWSIKNCPKDIESQVLSVIGLIDKKGSASDMDLCKIFGEVLWSDGKYFNSHAFRFLFDHETLSCEVTKRHLH
>Mature_76_residues
SMTHKWSIKNCPKDIESQVLSVIGLIDKKGSASDMDLCKIFGEVLWSDGKYFNSHAFRFLFDHETLSCEVTKRHLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8888; Mature: 8757

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTHKWSIKNCPKDIESQVLSVIGLIDKKGSASDMDLCKIFGEVLWSDGKYFNSHAFRF
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
LFDHETLSCEVTKRHLH
EECCCCEEEEEECCCCC
>Mature Secondary Structure 
SMTHKWSIKNCPKDIESQVLSVIGLIDKKGSASDMDLCKIFGEVLWSDGKYFNSHAFRF
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE
LFDHETLSCEVTKRHLH
EECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA