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The map label for this gene is ygjK [H]

Identifier: 172087800

GI number: 172087800

Start: 372754

End: 375132

Strand: Reverse

Name: ygjK [H]

Synonym: VF_A0338

Alternate gene names: 172087800

Gene position: 375132-372754 (Counterclockwise)

Preceding gene: 59713522

Following gene: 59713517

Centisome position: 28.2

GC content: 40.48

Gene sequence:

>2379_bases
ATGAATTTAAAAATTTCTGCACTTGCTGTTGCTACTGCCCTTTTTGCTGTTGGATGTACCCAAACGACATCAACGACCAA
TACTTCTGATTTAAAAGCGGCTCAATATAAAAACGTTATCGATCGTACAGGCTCCCCTGATTACATGCGTGATTACGATT
TTGATAATCATCAACGCTTTAACCCTTTCTTTGATATGGGAGCATGGCACGGCCACCTACTACCAGATAATGACGATGGT
ATGGGAGGTTTTCCAGGTACAGCGCTACTAACTGAAGAATACATTAACTTTATGGCGAATAATTTTGATCGCTTAAGTGT
ATATAAAGATGGTAAAAAAGTTGAATTCAACATGGAGGCATACAGCCTTCCAGGAGCTTTAGTTCAAATATTAACATCTG
ATGATGTGACGATTGAAATGACACTTCGCTTTGCAACGAACCGTACCTCGTTAGTTGAAACCAAAATTATCACAAACACT
CCTGTTGAACTGATTTGGGACGGTCAATTAATCGAAGGAAATCACGCTAAAGAAGAAAAAAGCCAATCAGAAAAAACAAT
TGCTGAAGAGTACCCAAATTATAATCGAACCATTGTACCTACAGATGACGGTTTGAAGGTGACTTTTGGTAAAGTGAGAG
CGACTTGGTCACTGCTAACATCTGGTGAATCAGAGTATCAAATTCACAAATCGATACCTACAACGACAAAAGTTGAGGGG
TTAAGCTTTAATTCTACGGCAAGAATTGAACAATCCACCACAATCTACACCACTTATTCTCACGTCTTAACTGCTGAAGA
AAATCAAGAAGAACAAATTAAGATCTTGGATATTTTCGCCCACCCACAACAATACTTAACGGCAAGTGAACAACGTTGGG
AAAATTATCTAGAAAAAGGATTAACAAACCCTAACGCAACACCAGCCCAAGAGCGTGTAGCTGTAAAAGCAATGGAAACC
TTAAATGCCAACTGGCGTGGGGCAGCTGGTGCAATGCAATTTGATTCGGTAACGCCATCGGTTACTGCTCGCTGGTTCTC
TGGAAATCAAACATGGCCTTGGGATACATGGAAGCAAGCTTATGCAATGGCACACTTCAATCCTGAAGTCGCTAAAAACA
ACATTCGAGCAATGTTTGCTTATCAAATCCAAGCTGATGATGCTGTTCGCCCATGGGACAAAGGCTTTATACCTGACTTA
GTTGCATACAACACAAGTCCAGAGCGAGGCGGTGACGGTGGTAACTGGAATGAAAGAAACACCAAACCAAGTCTTGCTGC
ATGGGCAGTAATGGAAGTGTACAAAACCACTGAAGATAAAGCATGGTTAGAAGAAATGTACCCTAAATTGGTTGCTTATC
ATGATTGGTGGTTACGTAACCGTGACAATAATGGTAACGGCGTTCCTGAATACGGCGCTTCACGCGATAAAGCACACAAT
ACTGACAATGGCGATATGCTATTTACAGTTGAACATGGTAATAAAAAAGAAGAACTTGCTGGTTTAGATAAATACCAAGA
GATCATTAAATCTGGTAACTATGACCATATTAAGATCCCTGCACAAACTGCGGCCTCTTGGGAATCAGGTCGTGATGATG
CAGCAGCGTTTGGGTTTATCGATAAAGAGCAACTGGACGCTTATGTTAAAAATAGTGGAAAACGCTCTGATTGGGAAGTT
AAATTTGCTCAAAATCGAGATAAAAATGGCACACTACTAGGATATTCATTGCTGCAAGAATCTGTTGACCAAGCAAGCTA
TATGTATAGTGATAACCAATACCTAGCTGAAATGGCCGATATATTAGGCAAAACATCTGAAGCAAAAGACTTTAGAGAAA
AAGCAGATAAGTTAGCCAACTACATTAATACCTGTATGTTTGATGAAGGTACTGGATTCTTCTACGATATTCGTATCGAA
GACAAACCATTAGCCAATGGCTGTGCTGGTAAACCTATTGTTGAACGAGGAAAAGGTCCTGAAGGTTGGTCTCCTCTCTT
CAACAAAGCGGCAACTCAATCTCATGCCGATGTTGTTGTTAAAGTAATGAAAGATCCTAAAGAATTTAATACGTATGTAC
CTTTAGGAACGGCAGCATTAACAAGTCCTGCTTTCGGTCCTGATATCTACTGGCGTGGCCGTGTTTGGGTTGATCAATTC
TATTTCGGATTAAAAGGAATGGAAAGTTACGGTTATCGTGATGATGCGGTACAAATGGCGAGTGCTTTCTTTGACCATGC
TGATGGCTTAGTTGGTGACGGTCCTATTCGTGAAAACTACAACCCACTAACGGGTGATCAACAAGGTGCTCCAAATTTCT
CTTGGAGTTCTGCTCACCTCTACATGCTTTATAATGATTTCTTTACTGCTGAAAAGTAA

Upstream 100 bases:

>100_bases
ACTTTGTGAGACAAGCTTCACTGAAACTCCTCTCATTTATAACTACTATGCAAAAGTTAAATTTAGTAAAACTTTACTTA
ACTGAGAATAAGAATCCACT

Downstream 100 bases:

>100_bases
GTAGATCACATTAGCTAATTAATAAAAAAAGGGATATGGTTAATTTCATATCCCTTTCTTCATTGTGCTACTCACGTTTT
ATTATGACTTCTTTTTTGTC

Product: putative glucosyl hydrolase precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MNLKISALAVATALFAVGCTQTTSTTNTSDLKAAQYKNVIDRTGSPDYMRDYDFDNHQRFNPFFDMGAWHGHLLPDNDDG
MGGFPGTALLTEEYINFMANNFDRLSVYKDGKKVEFNMEAYSLPGALVQILTSDDVTIEMTLRFATNRTSLVETKIITNT
PVELIWDGQLIEGNHAKEEKSQSEKTIAEEYPNYNRTIVPTDDGLKVTFGKVRATWSLLTSGESEYQIHKSIPTTTKVEG
LSFNSTARIEQSTTIYTTYSHVLTAEENQEEQIKILDIFAHPQQYLTASEQRWENYLEKGLTNPNATPAQERVAVKAMET
LNANWRGAAGAMQFDSVTPSVTARWFSGNQTWPWDTWKQAYAMAHFNPEVAKNNIRAMFAYQIQADDAVRPWDKGFIPDL
VAYNTSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTEDKAWLEEMYPKLVAYHDWWLRNRDNNGNGVPEYGASRDKAHN
TDNGDMLFTVEHGNKKEELAGLDKYQEIIKSGNYDHIKIPAQTAASWESGRDDAAAFGFIDKEQLDAYVKNSGKRSDWEV
KFAQNRDKNGTLLGYSLLQESVDQASYMYSDNQYLAEMADILGKTSEAKDFREKADKLANYINTCMFDEGTGFFYDIRIE
DKPLANGCAGKPIVERGKGPEGWSPLFNKAATQSHADVVVKVMKDPKEFNTYVPLGTAALTSPAFGPDIYWRGRVWVDQF
YFGLKGMESYGYRDDAVQMASAFFDHADGLVGDGPIRENYNPLTGDQQGAPNFSWSSAHLYMLYNDFFTAEK

Sequences:

>Translated_792_residues
MNLKISALAVATALFAVGCTQTTSTTNTSDLKAAQYKNVIDRTGSPDYMRDYDFDNHQRFNPFFDMGAWHGHLLPDNDDG
MGGFPGTALLTEEYINFMANNFDRLSVYKDGKKVEFNMEAYSLPGALVQILTSDDVTIEMTLRFATNRTSLVETKIITNT
PVELIWDGQLIEGNHAKEEKSQSEKTIAEEYPNYNRTIVPTDDGLKVTFGKVRATWSLLTSGESEYQIHKSIPTTTKVEG
LSFNSTARIEQSTTIYTTYSHVLTAEENQEEQIKILDIFAHPQQYLTASEQRWENYLEKGLTNPNATPAQERVAVKAMET
LNANWRGAAGAMQFDSVTPSVTARWFSGNQTWPWDTWKQAYAMAHFNPEVAKNNIRAMFAYQIQADDAVRPWDKGFIPDL
VAYNTSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTEDKAWLEEMYPKLVAYHDWWLRNRDNNGNGVPEYGASRDKAHN
TDNGDMLFTVEHGNKKEELAGLDKYQEIIKSGNYDHIKIPAQTAASWESGRDDAAAFGFIDKEQLDAYVKNSGKRSDWEV
KFAQNRDKNGTLLGYSLLQESVDQASYMYSDNQYLAEMADILGKTSEAKDFREKADKLANYINTCMFDEGTGFFYDIRIE
DKPLANGCAGKPIVERGKGPEGWSPLFNKAATQSHADVVVKVMKDPKEFNTYVPLGTAALTSPAFGPDIYWRGRVWVDQF
YFGLKGMESYGYRDDAVQMASAFFDHADGLVGDGPIRENYNPLTGDQQGAPNFSWSSAHLYMLYNDFFTAEK
>Mature_792_residues
MNLKISALAVATALFAVGCTQTTSTTNTSDLKAAQYKNVIDRTGSPDYMRDYDFDNHQRFNPFFDMGAWHGHLLPDNDDG
MGGFPGTALLTEEYINFMANNFDRLSVYKDGKKVEFNMEAYSLPGALVQILTSDDVTIEMTLRFATNRTSLVETKIITNT
PVELIWDGQLIEGNHAKEEKSQSEKTIAEEYPNYNRTIVPTDDGLKVTFGKVRATWSLLTSGESEYQIHKSIPTTTKVEG
LSFNSTARIEQSTTIYTTYSHVLTAEENQEEQIKILDIFAHPQQYLTASEQRWENYLEKGLTNPNATPAQERVAVKAMET
LNANWRGAAGAMQFDSVTPSVTARWFSGNQTWPWDTWKQAYAMAHFNPEVAKNNIRAMFAYQIQADDAVRPWDKGFIPDL
VAYNTSPERGGDGGNWNERNTKPSLAAWAVMEVYKTTEDKAWLEEMYPKLVAYHDWWLRNRDNNGNGVPEYGASRDKAHN
TDNGDMLFTVEHGNKKEELAGLDKYQEIIKSGNYDHIKIPAQTAASWESGRDDAAAFGFIDKEQLDAYVKNSGKRSDWEV
KFAQNRDKNGTLLGYSLLQESVDQASYMYSDNQYLAEMADILGKTSEAKDFREKADKLANYINTCMFDEGTGFFYDIRIE
DKPLANGCAGKPIVERGKGPEGWSPLFNKAATQSHADVVVKVMKDPKEFNTYVPLGTAALTSPAFGPDIYWRGRVWVDQF
YFGLKGMESYGYRDDAVQMASAFFDHADGLVGDGPIRENYNPLTGDQQGAPNFSWSSAHLYMLYNDFFTAEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=781, Percent_Identity=73.1113956466069, Blast_Score=1228, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 89245; Mature: 89245

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKISALAVATALFAVGCTQTTSTTNTSDLKAAQYKNVIDRTGSPDYMRDYDFDNHQRF
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCC
NPFFDMGAWHGHLLPDNDDGMGGFPGTALLTEEYINFMANNFDRLSVYKDGKKVEFNMEA
CCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHH
YSLPGALVQILTSDDVTIEMTLRFATNRTSLVETKIITNTPVELIWDGQLIEGNHAKEEK
HHCCHHHHEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCEEEEECCEEECCCCCHHHH
SQSEKTIAEEYPNYNRTIVPTDDGLKVTFGKVRATWSLLTSGESEYQIHKSIPTTTKVEG
HHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHEEEHHHHCCCCCEEEECCCCCCCEECC
LSFNSTARIEQSTTIYTTYSHVLTAEENQEEQIKILDIFAHPQQYLTASEQRWENYLEKG
CCCCCCEEEECCEEEEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHC
LTNPNATPAQERVAVKAMETLNANWRGAAGAMQFDSVTPSVTARWFSGNQTWPWDTWKQA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCHHHHHH
YAMAHFNPEVAKNNIRAMFAYQIQADDAVRPWDKGFIPDLVAYNTSPERGGDGGNWNERN
HHHHCCCHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCC
TKPSLAAWAVMEVYKTTEDKAWLEEMYPKLVAYHDWWLRNRDNNGNGVPEYGASRDKAHN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
TDNGDMLFTVEHGNKKEELAGLDKYQEIIKSGNYDHIKIPAQTAASWESGRDDAAAFGFI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCCCHHCCCC
DKEQLDAYVKNSGKRSDWEVKFAQNRDKNGTLLGYSLLQESVDQASYMYSDNQYLAEMAD
CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHEEECCCHHHHHHHH
ILGKTSEAKDFREKADKLANYINTCMFDEGTGFFYDIRIEDKPLANGCAGKPIVERGKGP
HHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCHHHCCCCC
EGWSPLFNKAATQSHADVVVKVMKDPKEFNTYVPLGTAALTSPAFGPDIYWRGRVWVDQF
CCCCHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHH
YFGLKGMESYGYRDDAVQMASAFFDHADGLVGDGPIRENYNPLTGDQQGAPNFSWSSAHL
HHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
YMLYNDFFTAEK
EEEEECHHCCCC
>Mature Secondary Structure
MNLKISALAVATALFAVGCTQTTSTTNTSDLKAAQYKNVIDRTGSPDYMRDYDFDNHQRF
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCC
NPFFDMGAWHGHLLPDNDDGMGGFPGTALLTEEYINFMANNFDRLSVYKDGKKVEFNMEA
CCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHH
YSLPGALVQILTSDDVTIEMTLRFATNRTSLVETKIITNTPVELIWDGQLIEGNHAKEEK
HHCCHHHHEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCEEEEECCEEECCCCCHHHH
SQSEKTIAEEYPNYNRTIVPTDDGLKVTFGKVRATWSLLTSGESEYQIHKSIPTTTKVEG
HHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHEEEHHHHCCCCCEEEECCCCCCCEECC
LSFNSTARIEQSTTIYTTYSHVLTAEENQEEQIKILDIFAHPQQYLTASEQRWENYLEKG
CCCCCCEEEECCEEEEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHC
LTNPNATPAQERVAVKAMETLNANWRGAAGAMQFDSVTPSVTARWFSGNQTWPWDTWKQA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCHHHHHH
YAMAHFNPEVAKNNIRAMFAYQIQADDAVRPWDKGFIPDLVAYNTSPERGGDGGNWNERN
HHHHCCCHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCC
TKPSLAAWAVMEVYKTTEDKAWLEEMYPKLVAYHDWWLRNRDNNGNGVPEYGASRDKAHN
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
TDNGDMLFTVEHGNKKEELAGLDKYQEIIKSGNYDHIKIPAQTAASWESGRDDAAAFGFI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCCCCCCCHHCCCC
DKEQLDAYVKNSGKRSDWEVKFAQNRDKNGTLLGYSLLQESVDQASYMYSDNQYLAEMAD
CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHEEECCCHHHHHHHH
ILGKTSEAKDFREKADKLANYINTCMFDEGTGFFYDIRIEDKPLANGCAGKPIVERGKGP
HHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCHHHCCCCC
EGWSPLFNKAATQSHADVVVKVMKDPKEFNTYVPLGTAALTSPAFGPDIYWRGRVWVDQF
CCCCHHHHHHHCCCHHHHHHHHHHCHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHH
YFGLKGMESYGYRDDAVQMASAFFDHADGLVGDGPIRENYNPLTGDQQGAPNFSWSSAHL
HHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
YMLYNDFFTAEK
EEEEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]