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The map label for this gene is 172087788

Identifier: 172087788

GI number: 172087788

Start: 22002

End: 22154

Strand: Reverse

Name: 172087788

Synonym: VF_A1173

Alternate gene names: NA

Gene position: 22154-22002 (Counterclockwise)

Preceding gene: 172087789

Following gene: 59713200

Centisome position: 1.67

GC content: 34.64

Gene sequence:

>153_bases
ATGTGCGATTTAAATGATGATTTTGAAGACTTGGAAATCAAACTAACGAAAGCAGAGATAAAACTATTAGGCTGGGATGA
CAAAGAGTGGCTGATTGAAGCAATAGTGTTTGTTTTCTTCATATGCGCCATCATTACTTTCTATTGTTCCTAA

Upstream 100 bases:

>100_bases
TGTTTAATTTAATTAAATACTGGTTTTAAATTATTCAATTTTTCTAAACCAAAAGGAGCGATAAGATCACTTTAAATTTC
AGACATAAAAAGGAATGGCT

Downstream 100 bases:

>100_bases
CCATTACTTTATAAATCAGTTTTCCTAGTTAGAAACAATAGAACTCAGAACAATAATTAATGTGTTGTTCGGCTTGGACC
GTTACGCACTAAATCTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 50

Protein sequence:

>50_residues
MCDLNDDFEDLEIKLTKAEIKLLGWDDKEWLIEAIVFVFFICAIITFYCS

Sequences:

>Translated_50_residues
MCDLNDDFEDLEIKLTKAEIKLLGWDDKEWLIEAIVFVFFICAIITFYCS
>Mature_50_residues
MCDLNDDFEDLEIKLTKAEIKLLGWDDKEWLIEAIVFVFFICAIITFYCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5922; Mature: 5922

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDLNDDFEDLEIKLTKAEIKLLGWDDKEWLIEAIVFVFFICAIITFYCS
CCCCCCCCCCCEEEEEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCDLNDDFEDLEIKLTKAEIKLLGWDDKEWLIEAIVFVFFICAIITFYCS
CCCCCCCCCCCEEEEEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA