Click here to switch to the map view.

The map label for this gene is yihD [H]

Identifier: 59713157

GI number: 59713157

Start: 2871108

End: 2871371

Strand: Direct

Name: yihD [H]

Synonym: VF_2550

Alternate gene names: 59713157

Gene position: 2871108-2871371 (Clockwise)

Preceding gene: 172087784

Following gene: 59713158

Centisome position: 99.09

GC content: 32.95

Gene sequence:

>264_bases
ATGAAATGTCACCGCGTAAATGAATTAATCGAATTAATTCACCCTGAATGGAAAAAAGAACCAGAACTAAATCTTATGCA
GTTTATTGTAAAACTTGCAGAAGAAACAAAATACGAAGGTAAGTTAGAAGACCTTACTGATGATGTTCTAATCTATCACC
TAAAAATGCGAAATAGCGAAAAAACAGAAATGATCCCAGGTCTTGCTAAAGACCAAGAAGATGATTTTAAAACCGCAATT
CTAAAAGCTCGTGGGATTTTATAA

Upstream 100 bases:

>100_bases
TTTTCTACATGAGAATCCGATCATTTACTTACTCTAACTGGTATTAACATCCCTTATAACTGATATATACTAACCCTAAT
AATTATAAGGAGAATGCTCA

Downstream 100 bases:

>100_bases
GTAACTCACCATGCTATGATCTGGTTTGTCACCGAACCAGATCGGTTTCCTATCAAATAAAACACACTTTTTTAACTAAA
TTTGAACCTTCTTACGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKLEDLTDDVLIYHLKMRNSEKTEMIPGLAKDQEDDFKTAI
LKARGIL

Sequences:

>Translated_87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKLEDLTDDVLIYHLKMRNSEKTEMIPGLAKDQEDDFKTAI
LKARGIL
>Mature_87_residues
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKLEDLTDDVLIYHLKMRNSEKTEMIPGLAKDQEDDFKTAI
LKARGIL

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0845 [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=87, Percent_Identity=64.367816091954, Blast_Score=128, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10267; Mature: 10267

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKLEDLTDDVLIYHLKMRNSE
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
KTEMIPGLAKDQEDDFKTAILKARGIL
CHHHCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKLEDLTDDVLIYHLKMRNSE
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
KTEMIPGLAKDQEDDFKTAILKARGIL
CHHHCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]