Click here to switch to the map view.

The map label for this gene is yqiC [H]

Identifier: 59713132

GI number: 59713132

Start: 2835774

End: 2836025

Strand: Direct

Name: yqiC [H]

Synonym: VF_2525

Alternate gene names: 59713132

Gene position: 2835774-2836025 (Clockwise)

Preceding gene: 59713131

Following gene: 59713136

Centisome position: 97.87

GC content: 35.32

Gene sequence:

>252_bases
ATGTTTGATCCAAAAAAGTTAGAGCAAGTAGCAAAACAAATTCATGAATCAATGCCGCAGCCAGTAAAAGAACTTGGTAG
TGATGTTGAACAAAAAGTTCGTCAAGCTATTCAAGGACAGTTAAATAAACTTGATGTTGTTAGCAGAGAAGAGTTTGATG
TCCAAACACAAGTTCTTTTACGTACTCGCCAAAAGCTAACAGCGATGGAACAAAAACTTGCTGAATTAGAAGAGAAACTT
TCGGAAAAATAA

Upstream 100 bases:

>100_bases
AAATTAAAGGCTACTTCGGTAGCCTTTTTTTTATTTGGATAGCGACAATTGGAAAGGCTTTACTTAGAATAAAGAAAAAG
TATTCAATTAAGGGTAAATA

Downstream 100 bases:

>100_bases
AACAATAAATAACCAACAATACAATCTGAAGTATCCAGTTTTGAGCTGATTATTGTATGTTATTAATTTATCCAGATTAC
AATAAAAAAGGCTTGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MFDPKKLEQVAKQIHESMPQPVKELGSDVEQKVRQAIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTAMEQKLAELEEKL
SEK

Sequences:

>Translated_83_residues
MFDPKKLEQVAKQIHESMPQPVKELGSDVEQKVRQAIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTAMEQKLAELEEKL
SEK
>Mature_83_residues
MFDPKKLEQVAKQIHESMPQPVKELGSDVEQKVRQAIQGQLNKLDVVSREEFDVQTQVLLRTRQKLTAMEQKLAELEEKL
SEK

Specific function: Unknown

COG id: COG2960

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082201, Length=82, Percent_Identity=63.4146341463415, Blast_Score=115, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007475 [H]

Pfam domain/function: PF04380 DUF526 [H]

EC number: NA

Molecular weight: Translated: 9646; Mature: 9646

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDPKKLEQVAKQIHESMPQPVKELGSDVEQKVRQAIQGQLNKLDVVSREEFDVQTQVLL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRQKLTAMEQKLAELEEKLSEK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDPKKLEQVAKQIHESMPQPVKELGSDVEQKVRQAIQGQLNKLDVVSREEFDVQTQVLL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRQKLTAMEQKLAELEEKLSEK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]