| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is cysQ [H]
Identifier: 59713069
GI number: 59713069
Start: 2760455
End: 2761273
Strand: Reverse
Name: cysQ [H]
Synonym: VF_2462
Alternate gene names: 59713069
Gene position: 2761273-2760455 (Counterclockwise)
Preceding gene: 172087780
Following gene: 59713068
Centisome position: 95.3
GC content: 42.12
Gene sequence:
>819_bases ATGGATTCTACACTTTCTCACCTTATCCCTGAGGTGATCAATATTGCACGTGCATCGGGTCAACTCATTCTCGATATATA CGAGAAAGGAGATTTCGAAGAGTTCATTAAGTCAGATGAAACTCCGGTGACCAGTGCTGATCTCGCCGCTCATAAATTAA TTATCGAAAAACTTTCTCAACTAACACCAGATATTCCTATTCTTTCTGAAGAAGATGCAGGGATATCTTTAGAGCAACGT GCTCAATGGGAGCGTTATGGGTTGGTTGACCCTCTTGATGGTACGCAAGAGTTCATCGCTCGCAGTGGTGATTTTGCTAC GATTATTGCTTTAGTTGAAAATAACCGTCCAGTAATGGGGGTTGTATATGGCCCAGTTTCTGGTGTGACGTACTACGCCT ATGAAGGGAAAGGTGCGTGGAAAATTCCTGATATGGATGAAAGTGTTCGTATTAGCACGTTAAAGCATGAAGATGAAAAA CAGCCAATTGCGATAGCGATCAGTCGACGCCAAGATATCAATAACATAACACGTTGTATGAGTTCTGATTGGAATTACGA TTTGGTTCCATTAGGGTCAGCTGCACTTAAAGCCTGTTTGGTCGCAGAAGGTGCTGTGGATTGTTATTTACGATTAGGAC CAACTGGCGAATGGGATACGGCTGCAACCCAGTGTATTGTTCAAGAAGCGGGAGGTCGCATCTTATCGACAGAGCTTGAA CCGCTTTCTTATAATGAACGAGAGTCATTAGAAAACCCGAATTTTATTGTTCTCGGTGACGAAAATTTACCGTGGAATAA CATTCTTACATGTAAATAA
Upstream 100 bases:
>100_bases CTCAGGCATCAGAGTTATTACATCATCTCGATTTTTCAGAGGCAAGATGCATTACCGCACTATTACTTGCTCAACAATTT TTAGCTAAGGAGTAATATTG
Downstream 100 bases:
>100_bases TTAGACCAAATCTTGATAAATTGATTATTAAGATTGCTATAATTTGACTACGCTACTCGAAAATTATTTTTTTTCAGAGT ACAATCCTTAATCATACTAA
Product: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDSTLSHLIPEVINIARASGQLILDIYEKGDFEEFIKSDETPVTSADLAAHKLIIEKLSQLTPDIPILSEEDAGISLEQR AQWERYGLVDPLDGTQEFIARSGDFATIIALVENNRPVMGVVYGPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEDEK QPIAIAISRRQDINNITRCMSSDWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTELE PLSYNERESLENPNFIVLGDENLPWNNILTCK
Sequences:
>Translated_272_residues MDSTLSHLIPEVINIARASGQLILDIYEKGDFEEFIKSDETPVTSADLAAHKLIIEKLSQLTPDIPILSEEDAGISLEQR AQWERYGLVDPLDGTQEFIARSGDFATIIALVENNRPVMGVVYGPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEDEK QPIAIAISRRQDINNITRCMSSDWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTELE PLSYNERESLENPNFIVLGDENLPWNNILTCK >Mature_272_residues MDSTLSHLIPEVINIARASGQLILDIYEKGDFEEFIKSDETPVTSADLAAHKLIIEKLSQLTPDIPILSEEDAGISLEQR AQWERYGLVDPLDGTQEFIARSGDFATIIALVENNRPVMGVVYGPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEDEK QPIAIAISRRQDINNITRCMSSDWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTELE PLSYNERESLENPNFIVLGDENLPWNNILTCK
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=259, Percent_Identity=25.8687258687259, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI221625487, Length=259, Percent_Identity=25.8687258687259, Blast_Score=85, Evalue=8e-17, Organism=Escherichia coli, GI1790659, Length=251, Percent_Identity=41.4342629482072, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1788882, Length=225, Percent_Identity=32.4444444444444, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71995905, Length=285, Percent_Identity=23.1578947368421, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71995897, Length=285, Percent_Identity=23.1578947368421, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202572, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320493, Length=202, Percent_Identity=29.7029702970297, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=26.4705882352941, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24664922, Length=245, Percent_Identity=27.7551020408163, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24641722, Length=277, Percent_Identity=24.9097472924188, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24664926, Length=236, Percent_Identity=25.8474576271186, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24664918, Length=273, Percent_Identity=24.9084249084249, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 30090; Mature: 30090
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTLSHLIPEVINIARASGQLILDIYEKGDFEEFIKSDETPVTSADLAAHKLIIEKLSQ CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTPDIPILSEEDAGISLEQRAQWERYGLVDPLDGTQEFIARSGDFATIIALVENNRPVMG HCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEE VVYGPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEDEKQPIAIAISRRQDINNITRCM EEECCCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHH SSDWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTELE CCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC PLSYNERESLENPNFIVLGDENLPWNNILTCK CCCCCHHHCCCCCCEEEECCCCCCCCCEEECC >Mature Secondary Structure MDSTLSHLIPEVINIARASGQLILDIYEKGDFEEFIKSDETPVTSADLAAHKLIIEKLSQ CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LTPDIPILSEEDAGISLEQRAQWERYGLVDPLDGTQEFIARSGDFATIIALVENNRPVMG HCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEE VVYGPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEDEKQPIAIAISRRQDINNITRCM EEECCCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHH SSDWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTELE CCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC PLSYNERESLENPNFIVLGDENLPWNNILTCK CCCCCHHHCCCCCCEEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]