Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 59712957

GI number: 59712957

Start: 2637402

End: 2637896

Strand: Reverse

Name: yibN [H]

Synonym: VF_2350

Alternate gene names: 59712957

Gene position: 2637896-2637402 (Counterclockwise)

Preceding gene: 172087766

Following gene: 59712956

Centisome position: 91.04

GC content: 36.97

Gene sequence:

>495_bases
ATGGTAACCGATCCGATTAGTGGTATTGAGTTATCTAATACATCAGAGATAAAGAATATGGAAACCTCGATCATTGATTT
TGTAAGCAACAACATGATTTTAGCTGTTGTGTGGATTGGTATTGTTGTCGCGTTAATTCAAAACGTAGTAAAACAAAAAA
CAGCGGGTTACCAAGAAGTCGACCCAGCACAAGCAACAACACTAATGAACCGTGAAGATGCGATTGTTTTAGATATTCGC
TCTAAAGATGAGTTTAAATCTGGTCATATTACGGATGCACGTCACATTTTACCAAGTGACATTAAAGCAGGTAACTTGCC
TGGTCTTGAAAACTCAAAAACAACCCCAATTATTGTGGTATGTAAAACAGGTCAGACAGCTCAAGCAGCAGCAAATGATT
TGCATAAAGCTGGCTTTGAGCAAGTTAAATTACTTAAGAATGGCCTAATCTCTTGGAATGAAGCTAACTTACCGTTAGTT
AAAGGCAAAAAATAA

Upstream 100 bases:

>100_bases
AACCAATATCACAGCATTTTCTTTGTATTAGCGAGTTTTTTTATCCTTGCTAGTTTCAGAACAAACCCTAGGGTATACTT
TCGCTTCAAATTTAGAGCCT

Downstream 100 bases:

>100_bases
TTGCCGCTTTCCTAAGCAATTGATTCATTTTGATGTGATATCTGGCTCATTTTTTAGATATCACGAATGCAGAGTAAGGT
GACATCGTTATTCTGCATTC

Product: rhodanese-related sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MVTDPISGIELSNTSEIKNMETSIIDFVSNNMILAVVWIGIVVALIQNVVKQKTAGYQEVDPAQATTLMNREDAIVLDIR
SKDEFKSGHITDARHILPSDIKAGNLPGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLV
KGKK

Sequences:

>Translated_164_residues
MVTDPISGIELSNTSEIKNMETSIIDFVSNNMILAVVWIGIVVALIQNVVKQKTAGYQEVDPAQATTLMNREDAIVLDIR
SKDEFKSGHITDARHILPSDIKAGNLPGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLV
KGKK
>Mature_164_residues
MVTDPISGIELSNTSEIKNMETSIIDFVSNNMILAVVWIGIVVALIQNVVKQKTAGYQEVDPAQATTLMNREDAIVLDIR
SKDEFKSGHITDARHILPSDIKAGNLPGLENSKTTPIIVVCKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLV
KGKK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=140, Percent_Identity=44.2857142857143, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 17789; Mature: 17789

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTDPISGIELSNTSEIKNMETSIIDFVSNNMILAVVWIGIVVALIQNVVKQKTAGYQEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DPAQATTLMNREDAIVLDIRSKDEFKSGHITDARHILPSDIKAGNLPGLENSKTTPIIVV
CCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEE
CKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLVKGKK
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MVTDPISGIELSNTSEIKNMETSIIDFVSNNMILAVVWIGIVVALIQNVVKQKTAGYQEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DPAQATTLMNREDAIVLDIRSKDEFKSGHITDARHILPSDIKAGNLPGLENSKTTPIIVV
CCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEE
CKTGQTAQAAANDLHKAGFEQVKLLKNGLISWNEANLPLVKGKK
ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]