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The map label for this gene is yhfA [H]

Identifier: 59712886

GI number: 59712886

Start: 2561765

End: 2562169

Strand: Reverse

Name: yhfA [H]

Synonym: VF_2279

Alternate gene names: 59712886

Gene position: 2562169-2561765 (Counterclockwise)

Preceding gene: 59712888

Following gene: 59712880

Centisome position: 88.43

GC content: 41.48

Gene sequence:

>405_bases
ATGAACGCTGAAGTTAAATGGATTGAGGGATTGTCTTTTCTAGGTCAATCTCAATCAGGTCACTCTATTGTTATGGATGG
CAATGGGGGAGAAAAAGCACCAAGCCCGATGGAAATGGTCTTAATGGCTGCTGGAGGATGCAGTTCTGTTGATGTTGTTG
ATGGACTTAAATCGGCGAATCAAGAAGTCACAGCTTGTGTTGCTAAGCTATCTAGTGAGCGTCGTGAAACCGCACCAAAG
CTGTTTACTTACATTAATATTCATTTTGAAGTAACAGGTAACAACCTAGACTCAACGATTGTCGAGAAAGTCACTGCTGA
TTCATTACAGAAATATTGCTCAGTCTGTTTAATGCTTGGTGAGGGCGTAAAAATGACGCACTCATGGGAGATTGTTTCAG
CTTAA

Upstream 100 bases:

>100_bases
CAATTGATTTCTTGACTTTGATCGTATGAATTGTGCGACCAAGGGCACAGTTTCGTGAAATGGATCACGAGTTTTCCTTT
TAAGTAGTAAAGAGGCTTTT

Downstream 100 bases:

>100_bases
ACTGTAGGCAACAAAGATTAGAAAAAAGCCTCGCAAGTTAATGCTTGCGAGGCTTTATTTTTAAGTTATGAGAGATTACA
GAATGAAGCGGCTTAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNAEVKWIEGLSFLGQSQSGHSIVMDGNGGEKAPSPMEMVLMAAGGCSSVDVVDGLKSANQEVTACVAKLSSERRETAPK
LFTYINIHFEVTGNNLDSTIVEKVTADSLQKYCSVCLMLGEGVKMTHSWEIVSA

Sequences:

>Translated_134_residues
MNAEVKWIEGLSFLGQSQSGHSIVMDGNGGEKAPSPMEMVLMAAGGCSSVDVVDGLKSANQEVTACVAKLSSERRETAPK
LFTYINIHFEVTGNNLDSTIVEKVTADSLQKYCSVCLMLGEGVKMTHSWEIVSA
>Mature_134_residues
MNAEVKWIEGLSFLGQSQSGHSIVMDGNGGEKAPSPMEMVLMAAGGCSSVDVVDGLKSANQEVTACVAKLSSERRETAPK
LFTYINIHFEVTGNNLDSTIVEKVTADSLQKYCSVCLMLGEGVKMTHSWEIVSA

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=134, Percent_Identity=61.1940298507463, Blast_Score=179, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 14331; Mature: 14331

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEVKWIEGLSFLGQSQSGHSIVMDGNGGEKAPSPMEMVLMAAGGCSSVDVVDGLKSAN
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHCC
QEVTACVAKLSSERRETAPKLFTYINIHFEVTGNNLDSTIVEKVTADSLQKYCSVCLMLG
HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGVKMTHSWEIVSA
CCCEEEECEEEECC
>Mature Secondary Structure
MNAEVKWIEGLSFLGQSQSGHSIVMDGNGGEKAPSPMEMVLMAAGGCSSVDVVDGLKSAN
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHCC
QEVTACVAKLSSERRETAPKLFTYINIHFEVTGNNLDSTIVEKVTADSLQKYCSVCLMLG
HHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
EGVKMTHSWEIVSA
CCCEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]