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The map label for this gene is yraP [C]

Identifier: 59712821

GI number: 59712821

Start: 2487593

End: 2488180

Strand: Direct

Name: yraP [C]

Synonym: VF_2214

Alternate gene names: 59712821

Gene position: 2487593-2488180 (Clockwise)

Preceding gene: 59712820

Following gene: 59712831

Centisome position: 85.85

GC content: 39.8

Gene sequence:

>588_bases
ATGAAATTAGTGAAATTAAGTGCTTTACTGCTTTCTGCGGTATTACTGCAAGGTTGTGCTGGCTTGTTCATTGCAGGAGC
GGCAACAACCGCGTCTGTTGTAACAGATAACCGCACAGTAAAAGAGCAACTATCAGACAAAAACTTATCCCTTGAAGCTA
CTGGGCTTGCCAATAAAGCACCTTACCAATACAACATGCGAGTTAGTGCTGTTGCTTATGACGGTAAAGTTCTATTAATG
GGACAAGCAAAAGATGCTCAAATGAATCAAGACTTTGAGAAAAAGATAAAAGATATGAAAGGAGTGAATACGGTTTATAA
CCAAATCAGAGTTCGCCCATTACTCACTTTTACTCAAATCAATAATGACAGCTGGATCACGACAAAAGTGAAATCTTCAC
TCCTCGCCAAAAGTGAATTAAACGGAATAAAAATCAGTGTATTTACTGAAGCTCAAGAAGTGTTCTTAGTTGGCTTTGTA
ACAGAAGAACAAGGCAACATTGCAGCAGACGTCGCTCGTAATATCAAGGGCGTAAAAGGCGTAATTAAAGCATTTGAATA
CGGCCAAGGTGGCAGTGTCGAGCAATAG

Upstream 100 bases:

>100_bases
CACCGTGTAGCTCGCATTCAAGAAGTTCACCTATTAACATTGCATTGCATTTGTGATCTTGTTGATCAGGTTCTTTTCCC
ACAACACACCGAGTAATAAT

Downstream 100 bases:

>100_bases
TTAATAACCAAAGCACAATAAAAAGCCTACATTTCTGTAGGCTTTTTAGTTGGATTCAATTGTTGCACTTTACTTAACGA
CTCTTAAGCTCGGACGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKLVKLSALLLSAVLLQGCAGLFIAGAATTASVVTDNRTVKEQLSDKNLSLEATGLANKAPYQYNMRVSAVAYDGKVLLM
GQAKDAQMNQDFEKKIKDMKGVNTVYNQIRVRPLLTFTQINNDSWITTKVKSSLLAKSELNGIKISVFTEAQEVFLVGFV
TEEQGNIAADVARNIKGVKGVIKAFEYGQGGSVEQ

Sequences:

>Translated_195_residues
MKLVKLSALLLSAVLLQGCAGLFIAGAATTASVVTDNRTVKEQLSDKNLSLEATGLANKAPYQYNMRVSAVAYDGKVLLM
GQAKDAQMNQDFEKKIKDMKGVNTVYNQIRVRPLLTFTQINNDSWITTKVKSSLLAKSELNGIKISVFTEAQEVFLVGFV
TEEQGNIAADVARNIKGVKGVIKAFEYGQGGSVEQ
>Mature_195_residues
MKLVKLSALLLSAVLLQGCAGLFIAGAATTASVVTDNRTVKEQLSDKNLSLEATGLANKAPYQYNMRVSAVAYDGKVLLM
GQAKDAQMNQDFEKKIKDMKGVNTVYNQIRVRPLLTFTQINNDSWITTKVKSSLLAKSELNGIKISVFTEAQEVFLVGFV
TEEQGNIAADVARNIKGVKGVIKAFEYGQGGSVEQ

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=189, Percent_Identity=37.5661375661376, Blast_Score=117, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 21124; Mature: 21124

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVKLSALLLSAVLLQGCAGLFIAGAATTASVVTDNRTVKEQLSDKNLSLEATGLANKA
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCC
PYQYNMRVSAVAYDGKVLLMGQAKDAQMNQDFEKKIKDMKGVNTVYNQIRVRPLLTFTQI
CEEECEEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEEEEE
NNDSWITTKVKSSLLAKSELNGIKISVFTEAQEVFLVGFVTEEQGNIAADVARNIKGVKG
CCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
VIKAFEYGQGGSVEQ
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLVKLSALLLSAVLLQGCAGLFIAGAATTASVVTDNRTVKEQLSDKNLSLEATGLANKA
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCC
PYQYNMRVSAVAYDGKVLLMGQAKDAQMNQDFEKKIKDMKGVNTVYNQIRVRPLLTFTQI
CEEECEEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEEEEE
NNDSWITTKVKSSLLAKSELNGIKISVFTEAQEVFLVGFVTEEQGNIAADVARNIKGVKG
CCCCEEEHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHH
VIKAFEYGQGGSVEQ
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]