| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ftsI [H]
Identifier: 59712814
GI number: 59712814
Start: 2480149
End: 2481888
Strand: Reverse
Name: ftsI [H]
Synonym: VF_2207
Alternate gene names: 59712814
Gene position: 2481888-2480149 (Counterclockwise)
Preceding gene: 59712815
Following gene: 59712813
Centisome position: 85.66
GC content: 43.16
Gene sequence:
>1740_bases ATGAAATTACCAAATAGAAAAAAAAACAATAAACGCATAACCAAAGCGCCACCAACATTTATCCAGTGGCGCTTTGGCGT TATTGTTTTCTTTGTCTTTCTTGCCTTAGCTATTCTTATTGCGCGAGCCGCTTATATCCAAGTTATTGAACCAGATAACC TTGTTAAGCAAGGTGATATGCGTTCTATCCGTGTTAAATCTCTCCCTTCTGCCAGAGGCATTATCTCTGATCGTAATGAT GAACAGCTTGCCGTAAGTGTACCTGTTGATGCGGTTTGGGCTGATCCTGTGACGATCTATAAAGAAGGTGGTTTGGCTGA GATTGAACGCTGGTATGCGCTTGCGGATGTATTAGGGCTTAAGCGTAAAGAGTTAATTTCTAAAATTGAAAAAAACAAAA AACGTCGTTTTATTTATCTTCAACGCCAAATATCCCCGGCGGTTGCTGCCTATATTAAAAAACTGAAATTAGCGGGTATT GGTTTAAAAGCTGAATCACGTCGTTATTACCCAACTGGTGAAATCAGTGCCCATGTTATTGGTGTAACAGGTATTGATAG TCATGGCCTTGAAGGGGTAGAACGTAGTTATGATGGTTGGTTAACTGGTGAGCCGGGACGTAGAACTGTACGTAAAGACC GTTATGGCCGAGTGGTTGAAAATATTTCTCTAAAAGAGAAACAAGAAGGGAAGCCATTAACTCTAAGTATCGATCAGCGT TTACAGGCGATTGCTTACCGTGCAATTAAGCAAGCTGTATCTGACTTTAGAGCGATGTCTGGCTCAGTTGTGATGATCGA TATTAAGACGGGCGAAGTACTTGCAATGGTAAATGCCCCTTCTTATAACCCGAACAATCGTGAGCAGTTACAAAGCTTTA GAATGCGTAACCGTGTGATTACCGATACGTTAGAACCGGGCTCTACAGTAAAACCTTTTGTTGTATTAGCTGCTTTAGAT GGTGGAACTGCGAACTTAGATACGATTATTGATACTGGTAATGGCATCATGCGTATTGGCGGTAGTCGTGTGCGTGATAG CTCGAAAGTTGGTAAAGCCGATCTAACTACTATCTTGAAGAAATCAAGTAACATCGGTGTTGCGCACTTAGCGTTAGGAA TGCCTTTGCAAGAGTTGTTAGCGGAATACGCGGCTGTTGGTCTTGCTGACCCATCAGGCTTAAACTTAATTGGTGAGGCT ACGGGTATTTTCCCTGATCGTCGTCGTTGGTCTGATTTCGAGATCGCCACATTAGCCTTTGGATATGGTTTGTCGGTTAC GCCAATCCAATTAGCGCACGCTTATGCCACATTAGGGGCTTATGGTGAATATAGACCACTTTCAATTTTGAAAACAACTG GACCAACACCGGGTAAGCAAGTGGTTAATCGCCAACATGCAAAAGCGGTATTAGAAATGATGGAAACCGTAACTCAACCT GGTGGTACAGCAACAAGAGCGGCAGTACCTGGCTACCGAGTTGCCGCTAAAACTGGTACTTCACGAAAAGCGGTTCGTGG TGGTTACAGTGATGAATACATGACGGTGACAGCAGGTGTTGCACCAGTCAGTAACCCCCGAATTGCGTTAGTTACTATCG TGAACCAACCACAAGGTGATGAGTATTACGCAGGTCAAGTTGCGGCACCTATCTTTGGTCAGGTCATGAAAGATGCGTTG CAAATTTTAAACGTAGCGCCAGATGAAAGTACCGTAAAACATATCGATGTATTGAATTAG
Upstream 100 bases:
>100_bases AAAGCGCTCTTGCTGAGCATAGCCGAGTTCAAGCTCGCTCAGTTCGAGAGTTAGATATGGAACGCCCTGCTCCAGATAAA GAAGTAATTATAAAACTACG
Downstream 100 bases:
>100_bases GAAAGTGATGATGCAGTTATCTGAATTACTGTTGCCTTGGTGCGATTTAAATCAATCTGTGGCGATTTCATCTATGACAT TGGACAGTCGCCAAGTTTCT
Product: transpeptidase (penicillin-binding protein 3)
Products: NA
Alternate protein names: Penicillin-binding protein 3; PBP-3; Peptidoglycan glycosyltransferase 3 [H]
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MKLPNRKKNNKRITKAPPTFIQWRFGVIVFFVFLALAILIARAAYIQVIEPDNLVKQGDMRSIRVKSLPSARGIISDRND EQLAVSVPVDAVWADPVTIYKEGGLAEIERWYALADVLGLKRKELISKIEKNKKRRFIYLQRQISPAVAAYIKKLKLAGI GLKAESRRYYPTGEISAHVIGVTGIDSHGLEGVERSYDGWLTGEPGRRTVRKDRYGRVVENISLKEKQEGKPLTLSIDQR LQAIAYRAIKQAVSDFRAMSGSVVMIDIKTGEVLAMVNAPSYNPNNREQLQSFRMRNRVITDTLEPGSTVKPFVVLAALD GGTANLDTIIDTGNGIMRIGGSRVRDSSKVGKADLTTILKKSSNIGVAHLALGMPLQELLAEYAAVGLADPSGLNLIGEA TGIFPDRRRWSDFEIATLAFGYGLSVTPIQLAHAYATLGAYGEYRPLSILKTTGPTPGKQVVNRQHAKAVLEMMETVTQP GGTATRAAVPGYRVAAKTGTSRKAVRGGYSDEYMTVTAGVAPVSNPRIALVTIVNQPQGDEYYAGQVAAPIFGQVMKDAL QILNVAPDESTVKHIDVLN
Sequences:
>Translated_579_residues MKLPNRKKNNKRITKAPPTFIQWRFGVIVFFVFLALAILIARAAYIQVIEPDNLVKQGDMRSIRVKSLPSARGIISDRND EQLAVSVPVDAVWADPVTIYKEGGLAEIERWYALADVLGLKRKELISKIEKNKKRRFIYLQRQISPAVAAYIKKLKLAGI GLKAESRRYYPTGEISAHVIGVTGIDSHGLEGVERSYDGWLTGEPGRRTVRKDRYGRVVENISLKEKQEGKPLTLSIDQR LQAIAYRAIKQAVSDFRAMSGSVVMIDIKTGEVLAMVNAPSYNPNNREQLQSFRMRNRVITDTLEPGSTVKPFVVLAALD GGTANLDTIIDTGNGIMRIGGSRVRDSSKVGKADLTTILKKSSNIGVAHLALGMPLQELLAEYAAVGLADPSGLNLIGEA TGIFPDRRRWSDFEIATLAFGYGLSVTPIQLAHAYATLGAYGEYRPLSILKTTGPTPGKQVVNRQHAKAVLEMMETVTQP GGTATRAAVPGYRVAAKTGTSRKAVRGGYSDEYMTVTAGVAPVSNPRIALVTIVNQPQGDEYYAGQVAAPIFGQVMKDAL QILNVAPDESTVKHIDVLN >Mature_579_residues MKLPNRKKNNKRITKAPPTFIQWRFGVIVFFVFLALAILIARAAYIQVIEPDNLVKQGDMRSIRVKSLPSARGIISDRND EQLAVSVPVDAVWADPVTIYKEGGLAEIERWYALADVLGLKRKELISKIEKNKKRRFIYLQRQISPAVAAYIKKLKLAGI GLKAESRRYYPTGEISAHVIGVTGIDSHGLEGVERSYDGWLTGEPGRRTVRKDRYGRVVENISLKEKQEGKPLTLSIDQR LQAIAYRAIKQAVSDFRAMSGSVVMIDIKTGEVLAMVNAPSYNPNNREQLQSFRMRNRVITDTLEPGSTVKPFVVLAALD GGTANLDTIIDTGNGIMRIGGSRVRDSSKVGKADLTTILKKSSNIGVAHLALGMPLQELLAEYAAVGLADPSGLNLIGEA TGIFPDRRRWSDFEIATLAFGYGLSVTPIQLAHAYATLGAYGEYRPLSILKTTGPTPGKQVVNRQHAKAVLEMMETVTQP GGTATRAAVPGYRVAAKTGTSRKAVRGGYSDEYMTVTAGVAPVSNPRIALVTIVNQPQGDEYYAGQVAAPIFGQVMKDAL QILNVAPDESTVKHIDVLN
Specific function: Cell wall formation. Essential for the formation of a septum of the murein sacculus. Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side. Note=The bulk of the molecule, except for the N-terminal membrane anchor region, protrudes into the periplasmic space, where it acts on murein (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=554, Percent_Identity=51.8050541516246, Blast_Score=597, Evalue=1e-172, Organism=Escherichia coli, GI1786854, Length=612, Percent_Identity=25.6535947712418, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: =2.4.1.129 [H]
Molecular weight: Translated: 63210; Mature: 63210
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPNRKKNNKRITKAPPTFIQWRFGVIVFFVFLALAILIARAAYIQVIEPDNLVKQGDM CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCC RSIRVKSLPSARGIISDRNDEQLAVSVPVDAVWADPVTIYKEGGLAEIERWYALADVLGL CEEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCC KRKELISKIEKNKKRRFIYLQRQISPAVAAYIKKLKLAGIGLKAESRRYYPTGEISAHVI HHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GVTGIDSHGLEGVERSYDGWLTGEPGRRTVRKDRYGRVVENISLKEKQEGKPLTLSIDQR EEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCEEEEHHHH LQAIAYRAIKQAVSDFRAMSGSVVMIDIKTGEVLAMVNAPSYNPNNREQLQSFRMRNRVI HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE TDTLEPGSTVKPFVVLAALDGGTANLDTIIDTGNGIMRIGGSRVRDSSKVGKADLTTILK EECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHH KSSNIGVAHLALGMPLQELLAEYAAVGLADPSGLNLIGEATGIFPDRRRWSDFEIATLAF CCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE GYGLSVTPIQLAHAYATLGAYGEYRPLSILKTTGPTPGKQVVNRQHAKAVLEMMETVTQP CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC GGTATRAAVPGYRVAAKTGTSRKAVRGGYSDEYMTVTAGVAPVSNPRIALVTIVNQPQGD CCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCC EYYAGQVAAPIFGQVMKDALQILNVAPDESTVKHIDVLN CEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCC >Mature Secondary Structure MKLPNRKKNNKRITKAPPTFIQWRFGVIVFFVFLALAILIARAAYIQVIEPDNLVKQGDM CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCCCC RSIRVKSLPSARGIISDRNDEQLAVSVPVDAVWADPVTIYKEGGLAEIERWYALADVLGL CEEEEECCCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCC KRKELISKIEKNKKRRFIYLQRQISPAVAAYIKKLKLAGIGLKAESRRYYPTGEISAHVI HHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GVTGIDSHGLEGVERSYDGWLTGEPGRRTVRKDRYGRVVENISLKEKQEGKPLTLSIDQR EEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCEEEEHHHH LQAIAYRAIKQAVSDFRAMSGSVVMIDIKTGEVLAMVNAPSYNPNNREQLQSFRMRNRVI HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCE TDTLEPGSTVKPFVVLAALDGGTANLDTIIDTGNGIMRIGGSRVRDSSKVGKADLTTILK EECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHH KSSNIGVAHLALGMPLQELLAEYAAVGLADPSGLNLIGEATGIFPDRRRWSDFEIATLAF CCCCCCEEEHHHCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE GYGLSVTPIQLAHAYATLGAYGEYRPLSILKTTGPTPGKQVVNRQHAKAVLEMMETVTQP CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC GGTATRAAVPGYRVAAKTGTSRKAVRGGYSDEYMTVTAGVAPVSNPRIALVTIVNQPQGD CCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCC EYYAGQVAAPIFGQVMKDALQILNVAPDESTVKHIDVLN CEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]