Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59712782

Identifier: 59712782

GI number: 59712782

Start: 2444849

End: 2445100

Strand: Reverse

Name: 59712782

Synonym: VF_2175

Alternate gene names: NA

Gene position: 2445100-2444849 (Counterclockwise)

Preceding gene: 59712783

Following gene: 59712780

Centisome position: 84.39

GC content: 40.08

Gene sequence:

>252_bases
ATGCGTCATTCAATATACCTACGTTTAGCGACTTTATTTATTAAAGCTGATTTAGCTCGTGAAGAGCGAGAGTGGAAACG
TGCCGTACGTAAAGTGCAATATGAAATTCCATGGGGAAATGAATATTTACTAAAAGATATAGGTTTGCATCTTGATGGTC
GAACTATCAGCGATCTTGAACAGCCTGTATTTAAAGCCGAGCGCAAAGTACGTCATCTTCGTCGACTCATACGCTTGAGA
ATAGCGACGTAA

Upstream 100 bases:

>100_bases
TCTATGGCTGCGAATATTGCGGCTATCTGAAGGGTTCTTTTGTATATTCCTCTAGCATTAGTCGCAATATCTCTCACATA
TCAATATTTGGAGAAATATT

Downstream 100 bases:

>100_bases
TAAATAGCCAGAGAAAGTAAATGGTGAATGCTTTCTCTGGCAACTTATATTATCTGTGTTTGTTATAATGCAGTGTATAT
ATTTATTATGATAAAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MRHSIYLRLATLFIKADLAREEREWKRAVRKVQYEIPWGNEYLLKDIGLHLDGRTISDLEQPVFKAERKVRHLRRLIRLR
IAT

Sequences:

>Translated_83_residues
MRHSIYLRLATLFIKADLAREEREWKRAVRKVQYEIPWGNEYLLKDIGLHLDGRTISDLEQPVFKAERKVRHLRRLIRLR
IAT
>Mature_83_residues
MRHSIYLRLATLFIKADLAREEREWKRAVRKVQYEIPWGNEYLLKDIGLHLDGRTISDLEQPVFKAERKVRHLRRLIRLR
IAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10067; Mature: 10067

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSIYLRLATLFIKADLAREEREWKRAVRKVQYEIPWGNEYLLKDIGLHLDGRTISDLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHH
QPVFKAERKVRHLRRLIRLRIAT
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHSIYLRLATLFIKADLAREEREWKRAVRKVQYEIPWGNEYLLKDIGLHLDGRTISDLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHH
QPVFKAERKVRHLRRLIRLRIAT
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA