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The map label for this gene is ygfY [C]

Identifier: 59712703

GI number: 59712703

Start: 2332982

End: 2333242

Strand: Reverse

Name: ygfY [C]

Synonym: VF_2096

Alternate gene names: 59712703

Gene position: 2333242-2332982 (Counterclockwise)

Preceding gene: 172087753

Following gene: 59712702

Centisome position: 80.53

GC content: 41.38

Gene sequence:

>261_bases
ATGTACAGTGCCGAAGAAAAAGCACGAGTTAAGTGGGCTTGCCGTCGTGGAATGCTGGAATTAGACGTGGTAATAATGCC
ATTCTTTGATGAATGTTTTGAAGAGCTAACAGAAGCAGAGCAACAAGCTTTTGTTTCATTATTAGAGTGTGATGATCCAG
ACCTATTTACATGGGTTATGGGGCATGGTCGCAGCGATAATCTTGCTCATGCATCTATGGTAGATAAAATCGTTGAGCAC
AACCTCAGTAAGTTACGTTAA

Upstream 100 bases:

>100_bases
TGTCGCATCTTCTTCATCTTATGACTTTAGATCATGGTTGTCGTTGAAATAGACTGATAAACTCAAGGCCGTTATTTTAT
TTTTTACGCTAGGGGACAGT

Downstream 100 bases:

>100_bases
AATAACGCTGAACTTCTCTTATATCGCCTATCTTGGATTGAATGGCAGTTACTTCTGCTTTGGGTGGGCGATATTATTGA
TGGATATTATTCCATTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MYSAEEKARVKWACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVMGHGRSDNLAHASMVDKIVEH
NLSKLR

Sequences:

>Translated_86_residues
MYSAEEKARVKWACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVMGHGRSDNLAHASMVDKIVEH
NLSKLR
>Mature_86_residues
MYSAEEKARVKWACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVMGHGRSDNLAHASMVDKIVEH
NLSKLR

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

Organism=Escherichia coli, GI1789264, Length=78, Percent_Identity=50, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2096_VIBF1 (Q5E305)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205479.1
- ProteinModelPortal:   Q5E305
- SMR:   Q5E305
- STRING:   Q5E305
- GeneID:   3279292
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_2096
- NMPDR:   fig|312309.3.peg.2096
- eggNOG:   COG2938
- HOGENOM:   HBG730588
- OMA:   DPDLFTW
- PhylomeDB:   Q5E305
- ProtClustDB:   CLSK874809
- BioCyc:   VFIS312309:VF2096-MONOMER
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 9981; Mature: 9981

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSAEEKARVKWACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVM
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GHGRSDNLAHASMVDKIVEHNLSKLR
CCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSAEEKARVKWACRRGMLELDVVIMPFFDECFEELTEAEQQAFVSLLECDDPDLFTWVM
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
GHGRSDNLAHASMVDKIVEHNLSKLR
CCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA