| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712641
Identifier: 59712641
GI number: 59712641
Start: 2264344
End: 2264745
Strand: Reverse
Name: 59712641
Synonym: VF_2034
Alternate gene names: NA
Gene position: 2264745-2264344 (Counterclockwise)
Preceding gene: 59712642
Following gene: 172087745
Centisome position: 78.16
GC content: 41.54
Gene sequence:
>402_bases ATGAGTGTTATTTCTGTGTATCAATCTGATCTTGAATTTGCTTTGCGCGGTGTAGGTTTTACCTCTCGCAAAATCAACAT GTTCTTAAAAGCATTTAATAAAGAAACCGCATCACAAGGTGTGGTTTGCTCGCTGGATTCACAACGCGCCATGCTTGTGA ATGTGAACGGTACAGAGCAAGGCTTATGTCTTTCTGATTTTATCACTGCTTGGTGGTCTTTTTGGGTTGTAGTTTTTAAT ACCACTGAAAATCCAGATTTAGAGCAGCAATCTCTTGGTGCTATTCGTGCGCTTTTCTTTATTTCTTCTTCGTGCCGTTC GGTTGCTCAGCAATCAATGATGCAGCAATGGTGGCGTGATTATGAGCCTGAGCATGGTTCTCCAATGATGGAGTCAATCT AA
Upstream 100 bases:
>100_bases TAACTTTTGATAAATCATCAGTACTTGAAGAGGCTCTTTCGCTAGAAAGCCAATTGGCTGAATTTATTATTAAAGCAAAA GACAACGCAGAGGTAACGGC
Downstream 100 bases:
>100_bases TGAGCAAAGATAAGTTTTTGGCCAAAATGACCATTGCTTTTATGCAGAACCACGGCGTTGCACCAACCGAAAGCCAGTTA GATGGTTGGTTAGAAGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSVISVYQSDLEFALRGVGFTSRKINMFLKAFNKETASQGVVCSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFN TTENPDLEQQSLGAIRALFFISSSCRSVAQQSMMQQWWRDYEPEHGSPMMESI
Sequences:
>Translated_133_residues MSVISVYQSDLEFALRGVGFTSRKINMFLKAFNKETASQGVVCSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFN TTENPDLEQQSLGAIRALFFISSSCRSVAQQSMMQQWWRDYEPEHGSPMMESI >Mature_132_residues SVISVYQSDLEFALRGVGFTSRKINMFLKAFNKETASQGVVCSLDSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFNT TENPDLEQQSLGAIRALFFISSSCRSVAQQSMMQQWWRDYEPEHGSPMMESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15108; Mature: 14977
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVISVYQSDLEFALRGVGFTSRKINMFLKAFNKETASQGVVCSLDSQRAMLVNVNGTEQ CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCC GLCLSDFITAWWSFWVVVFNTTENPDLEQQSLGAIRALFFISSSCRSVAQQSMMQQWWRD CCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEPEHGSPMMESI CCCCCCCCHHHCC >Mature Secondary Structure SVISVYQSDLEFALRGVGFTSRKINMFLKAFNKETASQGVVCSLDSQRAMLVNVNGTEQ CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCC GLCLSDFITAWWSFWVVVFNTTENPDLEQQSLGAIRALFFISSSCRSVAQQSMMQQWWRD CCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEPEHGSPMMESI CCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA