Click here to switch to the map view.

The map label for this gene is 59712637

Identifier: 59712637

GI number: 59712637

Start: 2260175

End: 2260729

Strand: Reverse

Name: 59712637

Synonym: VF_2030

Alternate gene names: NA

Gene position: 2260729-2260175 (Counterclockwise)

Preceding gene: 172087743

Following gene: 59712636

Centisome position: 78.02

GC content: 37.66

Gene sequence:

>555_bases
ATGAAAGATTTAATGTTAGACCTTGAAACAATGGGTAATGGTTCAGAAGCCGCAATTATGTCAATTGGTGCTTGTTATTT
TGATATTAAAACAGGGGAGATTGGTAATACATTCCATAAGCAAATTAACCTTGAAAGTGCGGTTGAGTCAGGCCTTGTTA
TTGATGCATCTACTGTCCTTTGGTGGATGAAACAATCAGAAGAAGCTCGTAGTAAGTTTTATGATAATGATGATGCGTTT
GGGATTCATCATGTGCTTGCAGAATTCGCTTCATTTGTAGAACCGCACGTTAAAGTTTGGGGTAATGGCGCTACGTTCGA
TAACGTAATCCTAAAAAATGCATATAAGCAATGCTTAAATATGGATGCGCCTTGGGCGTTTTATAATGATATGGATGTAA
GGACAATGGTTCGTCTTGGTCGTGAAGTTGGTTTTGACCCTAAAAAAGATATGCCGTTTGAAGGTGTTAAGCATGACGCA
TTAGCTGATGCTATTCACCAGGCTAAATATGTTTCAGCTATTTATCAAAAACTGATTACTACATCAGCGTCTTAA

Upstream 100 bases:

>100_bases
TGGGGAGTGTCAAAAGATGTGAATTACACAACCAATTTCAATACCGAGTTTTTAGATGCTTTTGTTGAAGAAGCAAAACG
ATTTTTATAAGGAAAGAATA

Downstream 100 bases:

>100_bases
TTAAACCTTATGCGTTAAGTTGCCACTGTTATGCGTTAAGTAAATTTTTAGCTTAACGCATAACGAAAATAAAATAGGAT
TTCAAATGAACCATTCACTA

Product: exodeoxyribonuclease VIII

Products: NA

Alternate protein names: Exodeoxyribonuclease VIII; Exonuclease Family Protein; Exonuclease; Exonuclease Phage Origin; Exonuclease RNAse T And DNA Polymerase III; Exodeoxyribonuclease VIII Bacteriophage Origin; Ribonuclease Prophage; ATP-Dependent; ExoO Exonuclease VIII; Prophage Exonuclease; Exodeoxyribonuclease; Phage Exodeoxyribonuclease; Phage Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKDLMLDLETMGNGSEAAIMSIGACYFDIKTGEIGNTFHKQINLESAVESGLVIDASTVLWWMKQSEEARSKFYDNDDAF
GIHHVLAEFASFVEPHVKVWGNGATFDNVILKNAYKQCLNMDAPWAFYNDMDVRTMVRLGREVGFDPKKDMPFEGVKHDA
LADAIHQAKYVSAIYQKLITTSAS

Sequences:

>Translated_184_residues
MKDLMLDLETMGNGSEAAIMSIGACYFDIKTGEIGNTFHKQINLESAVESGLVIDASTVLWWMKQSEEARSKFYDNDDAF
GIHHVLAEFASFVEPHVKVWGNGATFDNVILKNAYKQCLNMDAPWAFYNDMDVRTMVRLGREVGFDPKKDMPFEGVKHDA
LADAIHQAKYVSAIYQKLITTSAS
>Mature_184_residues
MKDLMLDLETMGNGSEAAIMSIGACYFDIKTGEIGNTFHKQINLESAVESGLVIDASTVLWWMKQSEEARSKFYDNDDAF
GIHHVLAEFASFVEPHVKVWGNGATFDNVILKNAYKQCLNMDAPWAFYNDMDVRTMVRLGREVGFDPKKDMPFEGVKHDA
LADAIHQAKYVSAIYQKLITTSAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20611; Mature: 20611

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLMLDLETMGNGSEAAIMSIGACYFDIKTGEIGNTFHKQINLESAVESGLVIDASTVL
CCCHHEEHHHCCCCCCHHHHHHCEEEEEEECCCCCHHHHHHCCHHHHHHCCEEEEHHHHH
WWMKQSEEARSKFYDNDDAFGIHHVLAEFASFVEPHVKVWGNGATFDNVILKNAYKQCLN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHC
MDAPWAFYNDMDVRTMVRLGREVGFDPKKDMPFEGVKHDALADAIHQAKYVSAIYQKLIT
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TSAS
CCCC
>Mature Secondary Structure
MKDLMLDLETMGNGSEAAIMSIGACYFDIKTGEIGNTFHKQINLESAVESGLVIDASTVL
CCCHHEEHHHCCCCCCHHHHHHCEEEEEEECCCCCHHHHHHCCHHHHHHCCEEEEHHHHH
WWMKQSEEARSKFYDNDDAFGIHHVLAEFASFVEPHVKVWGNGATFDNVILKNAYKQCLN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHC
MDAPWAFYNDMDVRTMVRLGREVGFDPKKDMPFEGVKHDALADAIHQAKYVSAIYQKLIT
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TSAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA