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The map label for this gene is nlpB [H]

Identifier: 59712524

GI number: 59712524

Start: 2146351

End: 2147403

Strand: Reverse

Name: nlpB [H]

Synonym: VF_1917

Alternate gene names: 59712524

Gene position: 2147403-2146351 (Counterclockwise)

Preceding gene: 59712525

Following gene: 59712519

Centisome position: 74.11

GC content: 40.55

Gene sequence:

>1053_bases
ATGAAAGTGAAGACTCGCTTTGTTGTTGGATCATTAATGATTGCTGTTTTATCAGCATGTTCAAGTAGTCCAACAGAGCG
TCGCCAAGCTAAACAAGATTTTAAGTATTTAGAAACTCCTCCTTTGGTTGAGTGGCAAGAGCCAGCGGATGCTAAACCTG
AGTTCTACCCACAATACGATATTCCTAAGGGGGAGTTTACAGGTGGTATCGGTAAAGAAGTAGATATTCGTCCACCTCAA
CAAGTACTTGAGCTTATTCCTGGTGCTCGTATTGAAGAGCAGAATGGAGAAGTAACGGTTTGGCTTGTTAAGCAAGAAGA
TGTTGATAAGCTTTGGCAAACGGTATTAACTTTAATGAAAAAGAAAGATATCGGTATTGTTAAAGAAGAGCCCTCAGAGA
TTGAAACTGACTGGTTAAAATGGAGCTCTGAAGATGAAGATCATGAGTTCGGTGCTCGTTATAAAATTAGCAAGCTAAAT
CAGAACAATCGTGTAGGCTTTCAAATCTTATTAATTGATTGGCAAGTAGATGGCAATCAAGCCGAAGTGACGCCTGCAAA
CAAAGCGCGTTATAACATTTTGATGACGAATTTAGTGACGTCAGCTTATGATGAGCAGTTACGTGAAGAAGCTCGTATCC
GTGCGGAAGAGTTAGTTAAGCGTATTCCTATTTCTATGGGACAAGATCGAAGTGGATTACCAGTTATCATTGCTCGTGCG
CCATACAATATTTTCTGGGAACGCTTAGGTGAGTTATTGCCTATGATGGGGCTTGCAATAGAAGATAGAAATCGCTCTCA
AGGTACAATCGAAGTTAAGTACAAAGAACCCGATGATGAATTCTGGGAAGAGATCGGTACTAAACCACTGTCTTTTGATG
GCCGTACCTATAACTTATTACTTGGCGACTTAGGCAACAGAACATCAATTAACGTAACAGATGCTGGTGGTAAGCCTGTT
GACGAAGATACGTTAGATTCATTAGTTCCTGTGTTAGCGGCGATGATTGAAAAATCAAACAACGCCCCAAAGACTGAGCA
AGATGAAGAATAA

Upstream 100 bases:

>100_bases
CGGATATTCGTTTACCATTAACGGAATTAAGTCTGTCAGCACAGCCAACGGTAGAGCAAGCGCTGAAAAGTGCGGGTTTG
TTGAAGTAGTAGGATAGAAA

Downstream 100 bases:

>100_bases
GCTAAAATAAAATGAAGAAAGGCGCTCGTTATTGAGCGTCTTTTTTTTGTTCTGAATTTTCTTTTTTATCTACCGTGTTT
TGTTTTTCAGCGTCAATATC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKVKTRFVVGSLMIAVLSACSSSPTERRQAKQDFKYLETPPLVEWQEPADAKPEFYPQYDIPKGEFTGGIGKEVDIRPPQ
QVLELIPGARIEEQNGEVTVWLVKQEDVDKLWQTVLTLMKKKDIGIVKEEPSEIETDWLKWSSEDEDHEFGARYKISKLN
QNNRVGFQILLIDWQVDGNQAEVTPANKARYNILMTNLVTSAYDEQLREEARIRAEELVKRIPISMGQDRSGLPVIIARA
PYNIFWERLGELLPMMGLAIEDRNRSQGTIEVKYKEPDDEFWEEIGTKPLSFDGRTYNLLLGDLGNRTSINVTDAGGKPV
DEDTLDSLVPVLAAMIEKSNNAPKTEQDEE

Sequences:

>Translated_350_residues
MKVKTRFVVGSLMIAVLSACSSSPTERRQAKQDFKYLETPPLVEWQEPADAKPEFYPQYDIPKGEFTGGIGKEVDIRPPQ
QVLELIPGARIEEQNGEVTVWLVKQEDVDKLWQTVLTLMKKKDIGIVKEEPSEIETDWLKWSSEDEDHEFGARYKISKLN
QNNRVGFQILLIDWQVDGNQAEVTPANKARYNILMTNLVTSAYDEQLREEARIRAEELVKRIPISMGQDRSGLPVIIARA
PYNIFWERLGELLPMMGLAIEDRNRSQGTIEVKYKEPDDEFWEEIGTKPLSFDGRTYNLLLGDLGNRTSINVTDAGGKPV
DEDTLDSLVPVLAAMIEKSNNAPKTEQDEE
>Mature_350_residues
MKVKTRFVVGSLMIAVLSACSSSPTERRQAKQDFKYLETPPLVEWQEPADAKPEFYPQYDIPKGEFTGGIGKEVDIRPPQ
QVLELIPGARIEEQNGEVTVWLVKQEDVDKLWQTVLTLMKKKDIGIVKEEPSEIETDWLKWSSEDEDHEFGARYKISKLN
QNNRVGFQILLIDWQVDGNQAEVTPANKARYNILMTNLVTSAYDEQLREEARIRAEELVKRIPISMGQDRSGLPVIIARA
PYNIFWERLGELLPMMGLAIEDRNRSQGTIEVKYKEPDDEFWEEIGTKPLSFDGRTYNLLLGDLGNRTSINVTDAGGKPV
DEDTLDSLVPVLAAMIEKSNNAPKTEQDEE

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=340, Percent_Identity=31.4705882352941, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 39813; Mature: 39813

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKTRFVVGSLMIAVLSACSSSPTERRQAKQDFKYLETPPLVEWQEPADAKPEFYPQYD
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IPKGEFTGGIGKEVDIRPPQQVLELIPGARIEEQNGEVTVWLVKQEDVDKLWQTVLTLMK
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
KKDIGIVKEEPSEIETDWLKWSSEDEDHEFGARYKISKLNQNNRVGFQILLIDWQVDGNQ
HCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCE
AEVTPANKARYNILMTNLVTSAYDEQLREEARIRAEELVKRIPISMGQDRSGLPVIIARA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PYNIFWERLGELLPMMGLAIEDRNRSQGTIEVKYKEPDDEFWEEIGTKPLSFDGRTYNLL
CHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEE
LGDLGNRTSINVTDAGGKPVDEDTLDSLVPVLAAMIEKSNNAPKTEQDEE
EECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKVKTRFVVGSLMIAVLSACSSSPTERRQAKQDFKYLETPPLVEWQEPADAKPEFYPQYD
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
IPKGEFTGGIGKEVDIRPPQQVLELIPGARIEEQNGEVTVWLVKQEDVDKLWQTVLTLMK
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
KKDIGIVKEEPSEIETDWLKWSSEDEDHEFGARYKISKLNQNNRVGFQILLIDWQVDGNQ
HCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCE
AEVTPANKARYNILMTNLVTSAYDEQLREEARIRAEELVKRIPISMGQDRSGLPVIIARA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PYNIFWERLGELLPMMGLAIEDRNRSQGTIEVKYKEPDDEFWEEIGTKPLSFDGRTYNLL
CHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEEE
LGDLGNRTSINVTDAGGKPVDEDTLDSLVPVLAAMIEKSNNAPKTEQDEE
EECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]