| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712523
Identifier: 59712523
GI number: 59712523
Start: 2146113
End: 2146322
Strand: Direct
Name: 59712523
Synonym: VF_1916
Alternate gene names: NA
Gene position: 2146113-2146322 (Clockwise)
Preceding gene: 59712522
Following gene: 59712526
Centisome position: 74.07
GC content: 30.95
Gene sequence:
>210_bases ATGGAATGGTTAATGAACCCTTGGGTAATCATTGTTATTGTTTTAAGTGTTGTTATTGGTAACCTTGCGGCATTAAAAGC AACGGCTAATATGAAATTTGGTCAATCAAAAAAAATGAAAAACCTTCAAGAACAAGATGATATTGACGCTGAAAAACAAA ACACGGTAGATAAAAAAGAAAATTCAGAACAAAAAAAAGACGCTCAATAA
Upstream 100 bases:
>100_bases AAGCATGGGAGGGTGTTGATCTGGCAGGAAAAGAGACCATCATTAAACACATAGATACATTATTTGTTCGCTATATAACA AACATAGACAAGGAGTAAAT
Downstream 100 bases:
>100_bases CGAGCGCCTTTCTTCATTTTATTTTAGCTTATTCTTCATCTTGCTCAGTCTTTGGGGCGTTGTTTGATTTTTCAATCATC GCCGCTAACACAGGAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MEWLMNPWVIIVIVLSVVIGNLAALKATANMKFGQSKKMKNLQEQDDIDAEKQNTVDKKENSEQKKDAQ
Sequences:
>Translated_69_residues MEWLMNPWVIIVIVLSVVIGNLAALKATANMKFGQSKKMKNLQEQDDIDAEKQNTVDKKENSEQKKDAQ >Mature_69_residues MEWLMNPWVIIVIVLSVVIGNLAALKATANMKFGQSKKMKNLQEQDDIDAEKQNTVDKKENSEQKKDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7846; Mature: 7846
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWLMNPWVIIVIVLSVVIGNLAALKATANMKFGQSKKMKNLQEQDDIDAEKQNTVDKKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCHHHHCCCCCC NSEQKKDAQ CCCCCCCCC >Mature Secondary Structure MEWLMNPWVIIVIVLSVVIGNLAALKATANMKFGQSKKMKNLQEQDDIDAEKQNTVDKKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHCCCCCHHHHCCCCCC NSEQKKDAQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA