| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is cysZ [H]
Identifier: 59712499
GI number: 59712499
Start: 2127962
End: 2128714
Strand: Direct
Name: cysZ [H]
Synonym: VF_1892
Alternate gene names: 59712499
Gene position: 2127962-2128714 (Clockwise)
Preceding gene: 172087732
Following gene: 59712500
Centisome position: 73.44
GC content: 36.25
Gene sequence:
>753_bases ATGAATTCGTTTAAACAATCTCAATCTGGGGTTCAATACTTTTTAAAAGGCATTTCATTAGCAATGACACCAGGCTTGCG TCGATTTGTTTTTATCCCTTTATTGATTAATTTCTTATTGCTTGGTGGCTCTTTTATTTATTTATTTAATCAAATTGGTA GTTGGATTGACCAAATTCTAGCTCAAATACCAAGTTGGTTAGATTGGTTATCTTATTTGTTGTGGCCTTTAATTGTCATC AGTATATTAGCCGTCTTCTCATACTTCTTTAGTACATTAGCGAACTGGATTGCCGCTCCTTTTAATGGATTACTTGCTGA ACATCTTGAAGCAAAACTAACAGGACAACCTGCACCAAGTGGCGGAGTGTTAGATGCGGTAAAAGACTTGCCTCGCATCT TCAAACGTGAATGGCAAAAGTTGAAATACTACATACCTAAAGCATTAGGCCTATTTATTCTCTTTTTTATCCCTGCAATA GGTCAAAGCATTGCACCTGTTTTATGGTTTTTATTTACCGCTTGGATGATGGCTATTCAATATTGTGACTACCCATTTGA TAATCATAAAGTTCCATTTGAAACAATGAGAGATGAACTTAAAACAAAGCGTGGGAAATGTTTATCCTTTGGTTCGCTTG TAACACTTTTTACCATGACACCAATCCTAAACCTATTTGTTATGCCAATCGCAGTTTGTGGTGCGACCGCTATGTGGGTT GATGTTTACCGTGATACACATAAAAACCGTTAA
Upstream 100 bases:
>100_bases ATTTGAACTGTTTAGTGGAACTTTATTTGCTCATATTTCATTTATTTGTCTCAATTTTTGAGTATAGTGAACTCAACATC CACACAGTAAAATACAAATT
Downstream 100 bases:
>100_bases TCCATAACTTATAACCTTTTGATCCTTTCTCAATTTAAAAACTCTTCGTATTCTAGTTGTGTTGAGTTACTCAAATTGAG TTAAAAATAATTTATATAAT
Product: putative sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNSFKQSQSGVQYFLKGISLAMTPGLRRFVFIPLLINFLLLGGSFIYLFNQIGSWIDQILAQIPSWLDWLSYLLWPLIVI SILAVFSYFFSTLANWIAAPFNGLLAEHLEAKLTGQPAPSGGVLDAVKDLPRIFKREWQKLKYYIPKALGLFILFFIPAI GQSIAPVLWFLFTAWMMAIQYCDYPFDNHKVPFETMRDELKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV DVYRDTHKNR
Sequences:
>Translated_250_residues MNSFKQSQSGVQYFLKGISLAMTPGLRRFVFIPLLINFLLLGGSFIYLFNQIGSWIDQILAQIPSWLDWLSYLLWPLIVI SILAVFSYFFSTLANWIAAPFNGLLAEHLEAKLTGQPAPSGGVLDAVKDLPRIFKREWQKLKYYIPKALGLFILFFIPAI GQSIAPVLWFLFTAWMMAIQYCDYPFDNHKVPFETMRDELKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV DVYRDTHKNR >Mature_250_residues MNSFKQSQSGVQYFLKGISLAMTPGLRRFVFIPLLINFLLLGGSFIYLFNQIGSWIDQILAQIPSWLDWLSYLLWPLIVI SILAVFSYFFSTLANWIAAPFNGLLAEHLEAKLTGQPAPSGGVLDAVKDLPRIFKREWQKLKYYIPKALGLFILFFIPAI GQSIAPVLWFLFTAWMMAIQYCDYPFDNHKVPFETMRDELKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV DVYRDTHKNR
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=248, Percent_Identity=62.9032258064516, Blast_Score=340, Evalue=6e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 28598; Mature: 28598
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFKQSQSGVQYFLKGISLAMTPGLRRFVFIPLLINFLLLGGSFIYLFNQIGSWIDQIL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIPSWLDWLSYLLWPLIVISILAVFSYFFSTLANWIAAPFNGLLAEHLEAKLTGQPAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGVLDAVKDLPRIFKREWQKLKYYIPKALGLFILFFIPAIGQSIAPVLWFLFTAWMMAIQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCDYPFDNHKVPFETMRDELKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV HHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVYRDTHKNR HHHHHHCCCC >Mature Secondary Structure MNSFKQSQSGVQYFLKGISLAMTPGLRRFVFIPLLINFLLLGGSFIYLFNQIGSWIDQIL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIPSWLDWLSYLLWPLIVISILAVFSYFFSTLANWIAAPFNGLLAEHLEAKLTGQPAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGVLDAVKDLPRIFKREWQKLKYYIPKALGLFILFFIPAIGQSIAPVLWFLFTAWMMAIQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCDYPFDNHKVPFETMRDELKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV HHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVYRDTHKNR HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA