| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is flgA
Identifier: 59712487
GI number: 59712487
Start: 2114096
End: 2114863
Strand: Direct
Name: flgA
Synonym: VF_1880
Alternate gene names: NA
Gene position: 2114096-2114863 (Clockwise)
Preceding gene: 59712445
Following gene: 59712488
Centisome position: 72.96
GC content: 38.54
Gene sequence:
>768_bases ATGAAGAACACGATATACAACATGGCATTTTATATTGAAAATATGATGATAATAAAAAAATGTGATTACAGAACCACTTT TTATCGACTTATAAGCGTTATCGGCCTATTTATAAGTTTCTTTAGCTCGAATGTGCATGCTGCCACAGATGAACAGTTAG ATGCAATCAAACACGCTGCAGAAACTTTTCTACAATCCCAAATTGAAGTGCCTCAAAATGGTACTTTACATATTGAGGCT GCTCGTATCGATAGCAGAATACAAGCAACAGACTGCCCTGCACCATTAATTGCCTCTTTACCTGGCCGTCTTAATTCAAG CGGCAATACATCGGTTCTTGTTGAATGTCAGCCTGATGATTGGAAGGTGTATGTTCCGGTAAAAACAGAGTTAATGATGC CTTTAGTCACCGCAATCTCTTCTTTATCAAGAGGACACACCATTTCAAGCAGTGATTTAACATTAACGATGGTTAACAGC CGAACTTACCAACGAGGCGGTTATATTAATGTTGATGATCTCGTAGGTGCCCGCATTAAACGTAGTGTTAGAGCCGGTGA GACTGTAGAAAAAAACGACATCTGCATGGTATGTCGCAACGACAGTGTTATAATTAAAGCAGTAAAAGGTGAATTAAGTA TTATCACAAAAGGAACCGCACTTGGTGACGGGGCTCTTGGTGATAAAGTTAACGTTAAAAATGATAAATCCAATCGAATA GTAAATGGTATTGTCACCTCAGTCGGTGAAATTAGCATCCGTTTTTAA
Upstream 100 bases:
>100_bases ACAAGTTGTGTGCGCTGATTCACCGAATCCAGTATACCTGTCATTATATGACTCCATCTTGTGCCACTATGTAATTAAAC CGCGAGCCTAACATAACCCT
Downstream 100 bases:
>100_bases GATATTAATTAATATCGAATAAAATTTTTATTTTTTACTAAACTATCTTACTCGATTGCCGATAAATTGATCATGGCATC ATTTATGCTTAGTTTTACTA
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: Flagella Basal Body P-Ring Formation Protein FlgA; Flagellar Basal Body P-Ring Biosynthesis Protein; Flageller Protein FlgA; Flagellar Basal-Body P-Ring Formation Protein FlgA; Flagellar Biosynthesis; SAF Domain-Containing Protein; Flagellar Protein; Flagellar Basal Body P-Ring Biosynthesis Protein-Like
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKNTIYNMAFYIENMMIIKKCDYRTTFYRLISVIGLFISFFSSNVHAATDEQLDAIKHAAETFLQSQIEVPQNGTLHIEA ARIDSRIQATDCPAPLIASLPGRLNSSGNTSVLVECQPDDWKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNS RTYQRGGYINVDDLVGARIKRSVRAGETVEKNDICMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRI VNGIVTSVGEISIRF
Sequences:
>Translated_255_residues MKNTIYNMAFYIENMMIIKKCDYRTTFYRLISVIGLFISFFSSNVHAATDEQLDAIKHAAETFLQSQIEVPQNGTLHIEA ARIDSRIQATDCPAPLIASLPGRLNSSGNTSVLVECQPDDWKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNS RTYQRGGYINVDDLVGARIKRSVRAGETVEKNDICMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRI VNGIVTSVGEISIRF >Mature_255_residues MKNTIYNMAFYIENMMIIKKCDYRTTFYRLISVIGLFISFFSSNVHAATDEQLDAIKHAAETFLQSQIEVPQNGTLHIEA ARIDSRIQATDCPAPLIASLPGRLNSSGNTSVLVECQPDDWKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNS RTYQRGGYINVDDLVGARIKRSVRAGETVEKNDICMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRI VNGIVTSVGEISIRF
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28011; Mature: 28011
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTIYNMAFYIENMMIIKKCDYRTTFYRLISVIGLFISFFSSNVHAATDEQLDAIKHAA CCCHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ETFLQSQIEVPQNGTLHIEAARIDSRIQATDCPAPLIASLPGRLNSSGNTSVLVECQPDD HHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCC WKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVGARIK CEEEEEEHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEECCCCEEEHHHHHHHHHH RSVRAGETVEKNDICMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRI HHHHCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCHH VNGIVTSVGEISIRF HHHHHHCCCEEEEEC >Mature Secondary Structure MKNTIYNMAFYIENMMIIKKCDYRTTFYRLISVIGLFISFFSSNVHAATDEQLDAIKHAA CCCHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ETFLQSQIEVPQNGTLHIEAARIDSRIQATDCPAPLIASLPGRLNSSGNTSVLVECQPDD HHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCC WKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINVDDLVGARIK CEEEEEEHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCEECCCCEEEHHHHHHHHHH RSVRAGETVEKNDICMVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRI HHHHCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEECCCCCCCHH VNGIVTSVGEISIRF HHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA