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The map label for this gene is fliS [H]

Identifier: 59712465

GI number: 59712465

Start: 2089872

End: 2090282

Strand: Reverse

Name: fliS [H]

Synonym: VF_1858

Alternate gene names: 59712465

Gene position: 2090282-2089872 (Counterclockwise)

Preceding gene: 59712466

Following gene: 59712463

Centisome position: 72.14

GC content: 39.9

Gene sequence:

>411_bases
ATGAGAGGTTCACTACAGGCATATAAAAAGGTATCAATTGATAGCCAATTAAGTGCTGCATCACCTCATAAGGTAATTCA
AATGCTGATGGCTGGAGCTATTGAGCGTTTAATCCAAGGTAAAGCTGCCATGGAACAAGGCAACACACCAGTTAAAGGCG
AGCGTCTTGGCAAGGCATTAGACATCGTTATCAGTCTACGTTCATGTCTATCAATGGACGATGGTGGTGAAATTGCAAGT
AACCTAGATTCTTTATACGATTTTATGATCCGCCAAATTTCACACGCTAACCAAAATAATGATGGTCAAGCTATTGATGA
CGTCGTAGAAATGTTACGTGAAATCAAATCAGCTTGGGATCAAATTCCTGCAGAATTTCATAACCTTACCGCAGATCAAG
TTGGTATCTAA

Upstream 100 bases:

>100_bases
AGAGTTAGGGCAGCAATTTGCACTTGATTATCAAAAACTGAATCATGCGAAGAAATCGGTTCAGTTGTATAGAAAATTTC
AATAAAACTGAGGAAATACG

Downstream 100 bases:

>100_bases
TTAAACCGATTTTATAAATCAAATTTATTTTTCGATTTTTATACTAACCTCTCATTTACAACATGACTGTCGATAAGTAG
ACAGTCATAGTTGCCTTATT

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRGSLQAYKKVSIDSQLSAASPHKVIQMLMAGAIERLIQGKAAMEQGNTPVKGERLGKALDIVISLRSCLSMDDGGEIAS
NLDSLYDFMIRQISHANQNNDGQAIDDVVEMLREIKSAWDQIPAEFHNLTADQVGI

Sequences:

>Translated_136_residues
MRGSLQAYKKVSIDSQLSAASPHKVIQMLMAGAIERLIQGKAAMEQGNTPVKGERLGKALDIVISLRSCLSMDDGGEIAS
NLDSLYDFMIRQISHANQNNDGQAIDDVVEMLREIKSAWDQIPAEFHNLTADQVGI
>Mature_136_residues
MRGSLQAYKKVSIDSQLSAASPHKVIQMLMAGAIERLIQGKAAMEQGNTPVKGERLGKALDIVISLRSCLSMDDGGEIAS
NLDSLYDFMIRQISHANQNNDGQAIDDVVEMLREIKSAWDQIPAEFHNLTADQVGI

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=32.4786324786325, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14855; Mature: 14855

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSLQAYKKVSIDSQLSAASPHKVIQMLMAGAIERLIQGKAAMEQGNTPVKGERLGKAL
CCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIVISLRSCLSMDDGGEIASNLDSLYDFMIRQISHANQNNDGQAIDDVVEMLREIKSAWD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QIPAEFHNLTADQVGI
HHHHHHHHCCHHHCCC
>Mature Secondary Structure
MRGSLQAYKKVSIDSQLSAASPHKVIQMLMAGAIERLIQGKAAMEQGNTPVKGERLGKAL
CCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIVISLRSCLSMDDGGEIASNLDSLYDFMIRQISHANQNNDGQAIDDVVEMLREIKSAWD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QIPAEFHNLTADQVGI
HHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]