| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is sixA [H]
Identifier: 59712415
GI number: 59712415
Start: 2039153
End: 2039623
Strand: Reverse
Name: sixA [H]
Synonym: VF_1808
Alternate gene names: 59712415
Gene position: 2039623-2039153 (Counterclockwise)
Preceding gene: 59712417
Following gene: 59712413
Centisome position: 70.39
GC content: 40.55
Gene sequence:
>471_bases ATGAAAGTATTCATAATGCGTCACGGTGAGGCTGAAGCTTATGCTCCTTCAGATGAAGAGCGTAATTTAACCGCTCATGG CGAAAGCCAATCTGCGAAAATAGCGCAATGGCTGATGGCTGAACATAAGATACAGTTTGATTATGTCTTGGTTAGCCCTT ATGTTCGAGCGCAACAAACGTGGAATACGATTAAGTCAATTTTGAATGTGGCGGACGCAAAAGTAGAAATATGTGAAGAT ATTACTCCTTATGGCGACTCAGATGATGTGGTTGAGTATGTAAAAGCTTTGGGAAGTGTTGAGGATATTGAGAATATTTT ATTAGTCTCTCACTTACCACTCGTTGGCTACCTTACTGCTGATTTTGTTCCGGGAATTATGCCTCCGATGTTCCCAACAT CAGCAATGTCTTGTGTTGAATATTCATATACAACAGGGAAAAGTGAGTTACTTTGGTTGCAGCAACCATAA
Upstream 100 bases:
>100_bases AATTATGGCGCTGATACCACAGACTAGCAAACTCTCTCTTTCCTATTTTTACTTTTGCTTGCTACTATTGTGAAGTTAGT AATGATTTGAGAATGAATAA
Downstream 100 bases:
>100_bases ATTCATATAGAAAACAGATGAAATAAAAAAGATCCCAGAGCTTAACGGCTGTGGGATCTTTTTTTATCTATCAGGTATTG AGAGTAATACTAGAATGGCA
Product: phosphohistidine phosphatase
Products: NA
Alternate protein names: RX6 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKVFIMRHGEAEAYAPSDEERNLTAHGESQSAKIAQWLMAEHKIQFDYVLVSPYVRAQQTWNTIKSILNVADAKVEICED ITPYGDSDDVVEYVKALGSVEDIENILLVSHLPLVGYLTADFVPGIMPPMFPTSAMSCVEYSYTTGKSELLWLQQP
Sequences:
>Translated_156_residues MKVFIMRHGEAEAYAPSDEERNLTAHGESQSAKIAQWLMAEHKIQFDYVLVSPYVRAQQTWNTIKSILNVADAKVEICED ITPYGDSDDVVEYVKALGSVEDIENILLVSHLPLVGYLTADFVPGIMPPMFPTSAMSCVEYSYTTGKSELLWLQQP >Mature_156_residues MKVFIMRHGEAEAYAPSDEERNLTAHGESQSAKIAQWLMAEHKIQFDYVLVSPYVRAQQTWNTIKSILNVADAKVEICED ITPYGDSDDVVEYVKALGSVEDIENILLVSHLPLVGYLTADFVPGIMPPMFPTSAMSCVEYSYTTGKSELLWLQQP
Specific function: Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His- Asp phosphorelay [H]
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788681, Length=156, Percent_Identity=42.3076923076923, Blast_Score=121, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: 3.1.3.- [C]
Molecular weight: Translated: 17488; Mature: 17488
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFIMRHGEAEAYAPSDEERNLTAHGESQSAKIAQWLMAEHKIQFDYVLVSPYVRAQQT CEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHH WNTIKSILNVADAKVEICEDITPYGDSDDVVEYVKALGSVEDIENILLVSHLPLVGYLTA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH DFVPGIMPPMFPTSAMSCVEYSYTTGKSELLWLQQP HHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MKVFIMRHGEAEAYAPSDEERNLTAHGESQSAKIAQWLMAEHKIQFDYVLVSPYVRAQQT CEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCEEEEEEECCHHHHHHH WNTIKSILNVADAKVEICEDITPYGDSDDVVEYVKALGSVEDIENILLVSHLPLVGYLTA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH DFVPGIMPPMFPTSAMSCVEYSYTTGKSELLWLQQP HHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9489669; 9205837; 9278503 [H]