| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yceG [C]
Identifier: 59712343
GI number: 59712343
Start: 1959956
End: 1960861
Strand: Reverse
Name: yceG [C]
Synonym: VF_1736
Alternate gene names: 59712343
Gene position: 1960861-1959956 (Counterclockwise)
Preceding gene: 59712344
Following gene: 59712342
Centisome position: 67.67
GC content: 37.64
Gene sequence:
>906_bases ATGCTAGAGAACGCTCAACTTGTTGAAGTAAAACCAGGGACAAGTTATCGAAAACTCATCCGTCAACTTGAAGAAAATAA ATGGATATCTGATGCTAAATGGGCACGGTTTACTCATAAAGTATCGCCTCAGCTAATAAATATTAAAGCCGGTACTTATT GGGTTGAACCAAACCAAACACTTGCAGATGTGTTAACTCAGCTAAAAACAGGTAAAGAACATCAATTCTCAATTACTTTT GTAGAAGGAAGTCGTTTTTCTGAATGGCAACAACAGCTGGAACAAGCTCCTTATCTGGAGCATGAGCTTGAGGGAATGTC AGAAAAAGAAATTGCGAACAAGTTGGGTATTGAACGAACTAAATTGGAAGGCTTATTTTTAGCTGAAACATACCATTACA CCGCAGGTATGAGTGATTTTGATATTTTAGAGCGTTCTCATAAAGCATTAACAACATTATTAGATGCGGAATGGAAAACA AAGTCAGCTAATTTACCGTTAAAATCTTCTTATGAAGCATTAATTCTAGCGTCTATTATCGAAAAAGAGACGGCAATTGA CTCTGAGAGAGAGCGAGTTTCATCTGTGTTTGTTAACCGCTTAAAGCGTGGTATGCGTCTACAAACAGACCCTACGGTTA TTTATGGTATGGGTGACAAATACGACGGTAATATTCGTAAGAAAGATCTACGAACACCTACGGCTTATAATACTTATACA ATTAATGGATTACCGCCAACGCCTATTGCTATGGCCGGTCCTGCTTCAATAAAAGCAGCTCTTCATCCTGAAACAAGCCG ATACTTATATTTTGTCGCTGATGGTACTGGCGGTCATAAATTCACTAAATCATTAGTTGAGCATAACAAAGCGGTTAGAG CTTACTTAAGAACTTTAAGAAATTAA
Upstream 100 bases:
>100_bases ACATTAACTCATTGGTTTCAGGAGAAACTGTACTCGTGTTGAAAAAACTAATTATCATTATTTTATATCGTGTGATCGGG TCGATTGAGTCATTAGACTG
Downstream 100 bases:
>100_bases TCATGTCTAAATTTATTGTAATCGAAGGCCTAGAAGGCGCAGGCAAAAGTACAGCAATTAAGAACGTACTAGCTACATTG GCAAAACACGGTATTACGTC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLENAQLVEVKPGTSYRKLIRQLEENKWISDAKWARFTHKVSPQLINIKAGTYWVEPNQTLADVLTQLKTGKEHQFSITF VEGSRFSEWQQQLEQAPYLEHELEGMSEKEIANKLGIERTKLEGLFLAETYHYTAGMSDFDILERSHKALTTLLDAEWKT KSANLPLKSSYEALILASIIEKETAIDSERERVSSVFVNRLKRGMRLQTDPTVIYGMGDKYDGNIRKKDLRTPTAYNTYT INGLPPTPIAMAGPASIKAALHPETSRYLYFVADGTGGHKFTKSLVEHNKAVRAYLRTLRN
Sequences:
>Translated_301_residues MLENAQLVEVKPGTSYRKLIRQLEENKWISDAKWARFTHKVSPQLINIKAGTYWVEPNQTLADVLTQLKTGKEHQFSITF VEGSRFSEWQQQLEQAPYLEHELEGMSEKEIANKLGIERTKLEGLFLAETYHYTAGMSDFDILERSHKALTTLLDAEWKT KSANLPLKSSYEALILASIIEKETAIDSERERVSSVFVNRLKRGMRLQTDPTVIYGMGDKYDGNIRKKDLRTPTAYNTYT INGLPPTPIAMAGPASIKAALHPETSRYLYFVADGTGGHKFTKSLVEHNKAVRAYLRTLRN >Mature_301_residues MLENAQLVEVKPGTSYRKLIRQLEENKWISDAKWARFTHKVSPQLINIKAGTYWVEPNQTLADVLTQLKTGKEHQFSITF VEGSRFSEWQQQLEQAPYLEHELEGMSEKEIANKLGIERTKLEGLFLAETYHYTAGMSDFDILERSHKALTTLLDAEWKT KSANLPLKSSYEALILASIIEKETAIDSERERVSSVFVNRLKRGMRLQTDPTVIYGMGDKYDGNIRKKDLRTPTAYNTYT INGLPPTPIAMAGPASIKAALHPETSRYLYFVADGTGGHKFTKSLVEHNKAVRAYLRTLRN
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=301, Percent_Identity=45.8471760797342, Blast_Score=281, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 34269; Mature: 34269
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENAQLVEVKPGTSYRKLIRQLEENKWISDAKWARFTHKVSPQLINIKAGTYWVEPNQT CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCEEEECCCHH LADVLTQLKTGKEHQFSITFVEGSRFSEWQQQLEQAPYLEHELEGMSEKEIANKLGIERT HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCHH KLEGLFLAETYHYTAGMSDFDILERSHKALTTLLDAEWKTKSANLPLKSSYEALILASII HHCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH EKETAIDSERERVSSVFVNRLKRGMRLQTDPTVIYGMGDKYDGNIRKKDLRTPTAYNTYT HHHHHCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCEEE INGLPPTPIAMAGPASIKAALHPETSRYLYFVADGTGGHKFTKSLVEHNKAVRAYLRTLR ECCCCCCCEEECCCHHEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC N C >Mature Secondary Structure MLENAQLVEVKPGTSYRKLIRQLEENKWISDAKWARFTHKVSPQLINIKAGTYWVEPNQT CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCEEEECCCHH LADVLTQLKTGKEHQFSITFVEGSRFSEWQQQLEQAPYLEHELEGMSEKEIANKLGIERT HHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCHH KLEGLFLAETYHYTAGMSDFDILERSHKALTTLLDAEWKTKSANLPLKSSYEALILASII HHCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH EKETAIDSERERVSSVFVNRLKRGMRLQTDPTVIYGMGDKYDGNIRKKDLRTPTAYNTYT HHHHHCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCEEE INGLPPTPIAMAGPASIKAALHPETSRYLYFVADGTGGHKFTKSLVEHNKAVRAYLRTLR ECCCCCCCEEECCCHHEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]