| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is apt [H]
Identifier: 59712295
GI number: 59712295
Start: 1900202
End: 1900747
Strand: Reverse
Name: apt [H]
Synonym: VF_1688
Alternate gene names: 59712295
Gene position: 1900747-1900202 (Counterclockwise)
Preceding gene: 59712296
Following gene: 59712294
Centisome position: 65.6
GC content: 40.48
Gene sequence:
>546_bases ATGTCTACAGAAACACTAACACTGATTAAGAACAGTATTAAATCAATTCCTGATTATCCTAAAGCTGGCATTATGTTCCG TGATGTAACAAGCCTAATGGAAGACCCAAAAGCATACCAAGCAACAATTCAATCATTAGTTGAAAAGTATAAGCAAGGCG GTTTTACTAAAATCGTTGGTACAGAAGCTCGTGGTTTCTTATTTGGTGCGCCATTAGCATTAGAGTTAGGTGTTGGCTTT GTTCCTGTTCGTAAACCAGGTAAATTGCCTCGTCCAACAATCGCACAAACATATGATCTTGAATACGGTACGGATACATT AGAAATTCATACTGATGCGATCGTTGAAGGCGACAAGGTGCTTGTTGTTGATGATCTATTAGCAACGGGTGGAACGATTG AAGCAACGGTAAAACTGATCCGCCAACTGGGTGGTGAAGTTGAGCATGCCGCATTTGTTATTAATCTTCCAGAAATTGGT GGCGAAACACGTTTAGAAGGCCTAGGTCTAAACGTATACAGCATTTGTGAGTTTGCTGGTCACTAA
Upstream 100 bases:
>100_bases ACCTTGTTTGGTAATACTTGCTCATGGATAAGAAAGTGAATACCATTGCCCGGTTAATTTATTTTTAAGCCCGAATAGAG GCAAAGCAGGTCAAATAACA
Downstream 100 bases:
>100_bases TTCTTCATATACACAGTTAATTACGTGAGATCTCTCTATCAAGGAAGATCTCATTTTTTTGCTGTGCTACGATTTAGAAC TATTTTATTTTGGGCTGTAT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSTETLTLIKNSIKSIPDYPKAGIMFRDVTSLMEDPKAYQATIQSLVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGF VPVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVINLPEIG GETRLEGLGLNVYSICEFAGH
Sequences:
>Translated_181_residues MSTETLTLIKNSIKSIPDYPKAGIMFRDVTSLMEDPKAYQATIQSLVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGF VPVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVINLPEIG GETRLEGLGLNVYSICEFAGH >Mature_180_residues STETLTLIKNSIKSIPDYPKAGIMFRDVTSLMEDPKAYQATIQSLVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGFV PVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVINLPEIGG ETRLEGLGLNVYSICEFAGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=168, Percent_Identity=43.452380952381, Blast_Score=142, Evalue=1e-34, Organism=Homo sapiens, GI71773201, Length=133, Percent_Identity=47.3684210526316, Blast_Score=125, Evalue=2e-29, Organism=Escherichia coli, GI1786675, Length=180, Percent_Identity=73.8888888888889, Blast_Score=267, Evalue=3e-73, Organism=Caenorhabditis elegans, GI17509087, Length=164, Percent_Identity=42.0731707317073, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=163, Percent_Identity=41.1042944785276, Blast_Score=116, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320649, Length=161, Percent_Identity=39.1304347826087, Blast_Score=94, Evalue=1e-20, Organism=Drosophila melanogaster, GI17136334, Length=179, Percent_Identity=40.7821229050279, Blast_Score=128, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 19553; Mature: 19422
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTETLTLIKNSIKSIPDYPKAGIMFRDVTSLMEDPKAYQATIQSLVEKYKQGGFTKIVG CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEC TEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKV CCCCCEEEECCEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECEEECCCEE LVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVINLPEIGGETRLEGLGLNVYSICEFAG EEEECHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHCC H C >Mature Secondary Structure STETLTLIKNSIKSIPDYPKAGIMFRDVTSLMEDPKAYQATIQSLVEKYKQGGFTKIVG CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEC TEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQTYDLEYGTDTLEIHTDAIVEGDKV CCCCCEEEECCEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCEEEEEECEEECCCEE LVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVINLPEIGGETRLEGLGLNVYSICEFAG EEEECHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA