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The map label for this gene is ycgN [C]

Identifier: 59712267

GI number: 59712267

Start: 1870948

End: 1871388

Strand: Reverse

Name: ycgN [C]

Synonym: VF_1660

Alternate gene names: 59712267

Gene position: 1871388-1870948 (Counterclockwise)

Preceding gene: 59712269

Following gene: 59712266

Centisome position: 64.59

GC content: 41.5

Gene sequence:

>441_bases
ATGACAGAGCAATTTTGGCAACAAAAAAAATTAGAAGAAATGACAGAACAAGAGTGGGAATCTCTTTGTGACGGCTGTGG
TAAGTGCTGTCTACACAAATTAATGGATGAAGATACAGATGAAGTTTACTACACCAATGTGGCATGTAGCTGGCTAAACA
GCAAAACATGCGCGTGTAAAGATTACCCAAAACGTTTCACATCAGGTGAAGAGTGTCTAAAACTAAGTCGTGAAAATATC
GCAGAATTTAACTGGTTGCCACTGACTTGTGCGTACCGTTTATTAGCGGAAGATAAGCCGTTACCTGAGTGGCACCCGCT
GATCACAGGTTCAAAATCAGCAATGCACGCCGCTGGTGAAAGTGTAAGAAATAAAGTGGTTTATGCTATTGATGTGAAGA
ACTGGGAAGATCACATCACCAACCATCCGCATAGAAGCTAA

Upstream 100 bases:

>100_bases
AAGGATGCGCAAGGTATCACTCTTCTATCTTTAGGTCAAAACTTGCTTTTTTGGAACAGAGTGGTATAAAACGGCCTCTT
CCCATAATGAGTGTAAAGCA

Downstream 100 bases:

>100_bases
TGTCTGAAAAAGTAAAAGCACAAAAGCCGGATCGTAAAACCGCAATGCGTAATATCATTGAGTTGGTGAAAGCTGACTTT
CCATTTGATGCACCAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCACKDYPKRFTSGEECLKLSRENI
AEFNWLPLTCAYRLLAEDKPLPEWHPLITGSKSAMHAAGESVRNKVVYAIDVKNWEDHITNHPHRS

Sequences:

>Translated_146_residues
MTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCACKDYPKRFTSGEECLKLSRENI
AEFNWLPLTCAYRLLAEDKPLPEWHPLITGSKSAMHAAGESVRNKVVYAIDVKNWEDHITNHPHRS
>Mature_145_residues
TEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCACKDYPKRFTSGEECLKLSRENIA
EFNWLPLTCAYRLLAEDKPLPEWHPLITGSKSAMHAAGESVRNKVVYAIDVKNWEDHITNHPHRS

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=139, Percent_Identity=64.0287769784173, Blast_Score=197, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1660_VIBF1 (Q5E491)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205043.1
- STRING:   Q5E491
- GeneID:   3278909
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1660
- NMPDR:   fig|312309.3.peg.1660
- eggNOG:   COG2983
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- PhylomeDB:   Q5E491
- ProtClustDB:   PRK05170
- BioCyc:   VFIS312309:VF1660-MONOMER
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 17005; Mature: 16874

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCACK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCC
DYPKRFTSGEECLKLSRENIAEFNWLPLTCAYRLLAEDKPLPEWHPLITGSKSAMHAAGE
HHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SVRNKVVYAIDVKNWEDHITNHPHRS
HHHCCEEEEEECCCHHHHHCCCCCCC
>Mature Secondary Structure 
TEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCACK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCC
DYPKRFTSGEECLKLSRENIAEFNWLPLTCAYRLLAEDKPLPEWHPLITGSKSAMHAAGE
HHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SVRNKVVYAIDVKNWEDHITNHPHRS
HHHCCEEEEEECCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA