| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712264
Identifier: 59712264
GI number: 59712264
Start: 1868925
End: 1869764
Strand: Reverse
Name: 59712264
Synonym: VF_1657
Alternate gene names: NA
Gene position: 1869764-1868925 (Counterclockwise)
Preceding gene: 59712266
Following gene: 59712261
Centisome position: 64.53
GC content: 38.33
Gene sequence:
>840_bases ATGAAATTAGAAGCTATTGATTACACTGCTGAAAATGCAGCAGAGCTGTTTGTAAAGTCGCTAAGAGAAACTGGATTTGG AGTGTTAAAAAATCATCCAATTCAACAAGAATCAGTACAAAGTATTTATGATAATTGGTATGCGTTTTTTAATAGCCAAG AGAAAGAAAACTTTCAATTTAATGTCGATACTCAAGATGGTTTTTTTCCTGCTTCAGTATCAGAAGTAGCCAAAGGCCAT ACTAAAAAAGACATTAAAGAGTATTATCATTATTATCCTACCGGTCAATGTCCTGCTGAATTAAAAGCACAAATTCAAGA GTACTACGATAACGCGAATACATTAGCGATTGAGCTTTTGTCTTGGGTAGAAGAATATTCACCAGAAGAGGTATCAGCAC TGTACTCACAATCTTTATCTAGCATGATAGAGGGAAGTGAAAAAACACTATTGCGTGTTCTTCATTATCCACCGCTAGAA GGGGATGAGGAGCTTGGTGCGATTCGTGCTGGGGCGCATGAAGATATTAATTTACTGACGGTGTTACCAGCAGCAAATGA GCCGGGTTTACAAGTTAAGACAAAAGAGGGTGATTGGTTAGATGTTCCATGTGATTTTGGTAATCTGATCATTAATATCG GTGATATGTTGCAAGAAGCATCGGGTGGCTATTACCCATCAACAACGCACCGAGTGATTAATCCTGAAGGTGCTGATAAG ACGAAGTCTCGTATTTCTTTACCTTTGTTCTTACACCCAAAACCAGAGGTTGTATTGTCTGAGCGTCATACTGCAAATAG CTATTTGATGGAGCGTTTACGAGAGTTAGGCGTAATTTAG
Upstream 100 bases:
>100_bases TACAATTCGCTTTGTATACTCAAATAGCAGAATGCCTTTTCTTAAGGTGAATAAAGACTATTGAGATCACCCCTTGCTCA ACAATAAAAAGAATACAATT
Downstream 100 bases:
>100_bases TTCTGATCCTCATCCAATAAAAAAAGGTAGAGCCTAATAACTCTACCTTTTTTATTTTCTATTACGCTAATTTGCTCTGT ATTGCGATGGTTGGTGGAAT
Product: oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Isopenicillin N Synthase; 2OG-Fe(II) Oxygenase Superfamily Protein; Iron/Ascorbate Family Oxidoreductase; Flavonol Synthase/Dioxygenase; 2og-Fe(Ii) Oxygenase; Iron/Ascorbate Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase Iron/Ascorbate Family Protein; 1-Aminocyclopropane-1-Carboxylate Oxidase; Oxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; Iron/Ascorbate-Dependent Oxidoreductase Family Protein; Oxidoreductase Iron/Ascorbate Family; 2OG-Fe(II) Oxygenase Family Protein; Fe-Containing Oxidoreductase; Isopenicillin-N Synthase; 2-Oxobutyrate Oxidase; Flavonol Synthase/Flavanone 3-Hydroxylase; 2-Oxoglutarate And Fe(Ii)-Dependent Oxygenase; Dioxygenase; Oxygenase/Oxidoreductase; Iron/Ascorbate Oxidoreductase Family Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQESVQSIYDNWYAFFNSQEKENFQFNVDTQDGFFPASVSEVAKGH TKKDIKEYYHYYPTGQCPAELKAQIQEYYDNANTLAIELLSWVEEYSPEEVSALYSQSLSSMIEGSEKTLLRVLHYPPLE GDEELGAIRAGAHEDINLLTVLPAANEPGLQVKTKEGDWLDVPCDFGNLIINIGDMLQEASGGYYPSTTHRVINPEGADK TKSRISLPLFLHPKPEVVLSERHTANSYLMERLRELGVI
Sequences:
>Translated_279_residues MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQESVQSIYDNWYAFFNSQEKENFQFNVDTQDGFFPASVSEVAKGH TKKDIKEYYHYYPTGQCPAELKAQIQEYYDNANTLAIELLSWVEEYSPEEVSALYSQSLSSMIEGSEKTLLRVLHYPPLE GDEELGAIRAGAHEDINLLTVLPAANEPGLQVKTKEGDWLDVPCDFGNLIINIGDMLQEASGGYYPSTTHRVINPEGADK TKSRISLPLFLHPKPEVVLSERHTANSYLMERLRELGVI >Mature_279_residues MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQESVQSIYDNWYAFFNSQEKENFQFNVDTQDGFFPASVSEVAKGH TKKDIKEYYHYYPTGQCPAELKAQIQEYYDNANTLAIELLSWVEEYSPEEVSALYSQSLSSMIEGSEKTLLRVLHYPPLE GDEELGAIRAGAHEDINLLTVLPAANEPGLQVKTKEGDWLDVPCDFGNLIINIGDMLQEASGGYYPSTTHRVINPEGADK TKSRISLPLFLHPKPEVVLSERHTANSYLMERLRELGVI
Specific function: Unknown
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI85816264, Length=274, Percent_Identity=25.9124087591241, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28572124, Length=259, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31471; Mature: 31471
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQESVQSIYDNWYAFFNSQEKENFQF CCCCEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE NVDTQDGFFPASVSEVAKGHTKKDIKEYYHYYPTGQCPAELKAQIQEYYDNANTLAIELL EECCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH SWVEEYSPEEVSALYSQSLSSMIEGSEKTLLRVLHYPPLEGDEELGAIRAGAHEDINLLT HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEE VLPAANEPGLQVKTKEGDWLDVPCDFGNLIINIGDMLQEASGGYYPSTTHRVINPEGADK EEECCCCCCCEEEECCCCEEECCCCCCHHEEHHHHHHHHHCCCCCCCCCCEEECCCCCCC TKSRISLPLFLHPKPEVVLSERHTANSYLMERLRELGVI HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQESVQSIYDNWYAFFNSQEKENFQF CCCCEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE NVDTQDGFFPASVSEVAKGHTKKDIKEYYHYYPTGQCPAELKAQIQEYYDNANTLAIELL EECCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH SWVEEYSPEEVSALYSQSLSSMIEGSEKTLLRVLHYPPLEGDEELGAIRAGAHEDINLLT HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEE VLPAANEPGLQVKTKEGDWLDVPCDFGNLIINIGDMLQEASGGYYPSTTHRVINPEGADK EEECCCCCCCEEEECCCCEEECCCCCCHHEEHHHHHHHHHCCCCCCCCCCEEECCCCCCC TKSRISLPLFLHPKPEVVLSERHTANSYLMERLRELGVI HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA