Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is yejM [H]

Identifier: 59712257

GI number: 59712257

Start: 1857657

End: 1859465

Strand: Direct

Name: yejM [H]

Synonym: VF_1650

Alternate gene names: 59712257

Gene position: 1857657-1859465 (Clockwise)

Preceding gene: 59712256

Following gene: 59712258

Centisome position: 64.11

GC content: 37.26

Gene sequence:

>1809_bases
ATGGTTGATAGCGGGAATACATACGGCGACAAAGTTTCTAAGTTAATTACTTGGGGTCACTGGTTTAGCTTTTTCAATAT
CATTGCAGCAATGCTTATTGGTACGCGTTATATAGCGCAATCACCATGGCCTGAGACCTTTCTTGGTCAAACCTATCTTG
TATTAAACTGGATAGGTCACTTTGGTTTCTTAATCTTTGGGTTTTACATTCTTGTTCTGTTTCCACTGACCTTTATTACG
CCATCGCAACGACTTATGCGTATTTTAAGTGTCATCATTGCAACGGCAGGAATGACTCTACTCTTATTAGATACATACGC
TTATCAAAACCTTCATTTACATATCACGCCGCTAGTGTGGGATATGTTACTTAACAATGATAAATCCAATTTAAATACAC
AATGGCAATACTTGTTCATTGTGGTACCCGTAATATTCCTACTACAACTCTCATTATCTGAATGGGTTTGGAATAAACTA
CGTAAACTTGCTCATAAGCATGTTGGTCGTCCATTTGCGATCACATTTGCCATCGCTTTTATTGGTAGTCACTTAATTCA
TACTTGGGCTGATGCATCAGCTTATGGTCCAGTAACGGCTCAGCGCGCTACATTCCCGCTCTCTTACCCTATGACAGCTC
GTTCATTTTTAGAAAAGCACGGATTCATTGACCGCGAGGCACTTGCAAAACAAATTCAAAATGAAGGAACTGGTGGCGCA
ACAGAAGCAATGCGTTACCCTCTTGAGCCTATTGCGTTTAAAACAAAACAAAAAGATTACAACTTGCAAATCATTATGAT
TGATAGCCTTCGAGCAGATACGCTAAATCATACTGACACACCAAATTTAACTCGATTTGCACAAAACAATCTGAACTATA
ACAACCACTACAGTGCGAGTAATAATCCAACAAGTTTATTCGGGTTATTCTATGGTCTGCCTGGTAATTACGTAGATAGT
TTTAGAAACTCACACATCGAATCACCAATTTTAACCGAACTACACGCTAGAAATTACCAATTTGGTCTATTTAGTGGCGA
TGATTTTAATTCATCTCTGTATAAGCAAATCATCTTTACCAACGGTGAAATTGCTCAATCAACAGAAAAAATGAATGATA
AAAAAGCAATTTCACAATGGAAAGATTGGTTCGGTCAACAAACAAGTGATAAACCTTGGTTTAGTTATTTAGAGCTTACA
TCTGTTTCTGAATACGATGACGCTGCGCCGATTTCGACTTCGAATGTAAGTCAAAACCTATTTGAAACAAACTACCGTAA
GGCAGTACAAAAAACAGATAAACAACTTAAAGCTGTTTTATCAACCTTAAAACAGTCCCCTGACTGGGAAAAAACCATTG
TTATCATCACTTCAAACCACGGTATGGAATTTGATGAAACACAAACAAACAGTTGGGGCTCAAGCACTAACTTTAGTGAG
TATCAACTACGTGTTCCAATGCTTATCCATTGGCCAAATGTAGAACCAGAACTCATTACAACAACATCTAGTCATTTAGA
TTTAGCGCCCACTTTAATGGAAGAGTTTTTAGGTACAACAACCCCTGCAAATAGCTACAGCAGTGGTATTAACCTATTTG
ACCAAACAGAAGAGCGTAATTGGTTACTTGCTGGAGACAGAAAAAATATAGCACTAATAACAGGAACAAATACTGTTGTT
ATTGATACTTTTGGTAACTATCGAGTTTACGATGAAAACTATCGTCGTTTAAAAGATGAGAAACCAAAACTGTCTTTATT
AATGCAAGGTATCTCTGAATTGAAGCGTTTTTACCACCCTAAAAAATAA

Upstream 100 bases:

>100_bases
CCAGCAGAACAGCGCCAAATCATCGCTGAAAAATTTGCTCAAGCACTACTTAGCTCACTAGATAAACCAAAAACTCACTA
AGAGCGAGAATTCACAGACC

Downstream 100 bases:

>100_bases
AAGGTGAATTAAAAACTCAAAATATTTCTAATCCCTTCCTTAATTGCGAAGGGATTTTTTTGCCTATAAAATACGAACAA
CTGCTTTATCCACTCCAAAT

Product: hydrolase, inner membrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGTRYIAQSPWPETFLGQTYLVLNWIGHFGFLIFGFYILVLFPLTFIT
PSQRLMRILSVIIATAGMTLLLLDTYAYQNLHLHITPLVWDMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKL
RKLAHKHVGRPFAITFAIAFIGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGFIDREALAKQIQNEGTGGA
TEAMRYPLEPIAFKTKQKDYNLQIIMIDSLRADTLNHTDTPNLTRFAQNNLNYNNHYSASNNPTSLFGLFYGLPGNYVDS
FRNSHIESPILTELHARNYQFGLFSGDDFNSSLYKQIIFTNGEIAQSTEKMNDKKAISQWKDWFGQQTSDKPWFSYLELT
SVSEYDDAAPISTSNVSQNLFETNYRKAVQKTDKQLKAVLSTLKQSPDWEKTIVIITSNHGMEFDETQTNSWGSSTNFSE
YQLRVPMLIHWPNVEPELITTTSSHLDLAPTLMEEFLGTTTPANSYSSGINLFDQTEERNWLLAGDRKNIALITGTNTVV
IDTFGNYRVYDENYRRLKDEKPKLSLLMQGISELKRFYHPKK

Sequences:

>Translated_602_residues
MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGTRYIAQSPWPETFLGQTYLVLNWIGHFGFLIFGFYILVLFPLTFIT
PSQRLMRILSVIIATAGMTLLLLDTYAYQNLHLHITPLVWDMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKL
RKLAHKHVGRPFAITFAIAFIGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGFIDREALAKQIQNEGTGGA
TEAMRYPLEPIAFKTKQKDYNLQIIMIDSLRADTLNHTDTPNLTRFAQNNLNYNNHYSASNNPTSLFGLFYGLPGNYVDS
FRNSHIESPILTELHARNYQFGLFSGDDFNSSLYKQIIFTNGEIAQSTEKMNDKKAISQWKDWFGQQTSDKPWFSYLELT
SVSEYDDAAPISTSNVSQNLFETNYRKAVQKTDKQLKAVLSTLKQSPDWEKTIVIITSNHGMEFDETQTNSWGSSTNFSE
YQLRVPMLIHWPNVEPELITTTSSHLDLAPTLMEEFLGTTTPANSYSSGINLFDQTEERNWLLAGDRKNIALITGTNTVV
IDTFGNYRVYDENYRRLKDEKPKLSLLMQGISELKRFYHPKK
>Mature_602_residues
MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGTRYIAQSPWPETFLGQTYLVLNWIGHFGFLIFGFYILVLFPLTFIT
PSQRLMRILSVIIATAGMTLLLLDTYAYQNLHLHITPLVWDMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKL
RKLAHKHVGRPFAITFAIAFIGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGFIDREALAKQIQNEGTGGA
TEAMRYPLEPIAFKTKQKDYNLQIIMIDSLRADTLNHTDTPNLTRFAQNNLNYNNHYSASNNPTSLFGLFYGLPGNYVDS
FRNSHIESPILTELHARNYQFGLFSGDDFNSSLYKQIIFTNGEIAQSTEKMNDKKAISQWKDWFGQQTSDKPWFSYLELT
SVSEYDDAAPISTSNVSQNLFETNYRKAVQKTDKQLKAVLSTLKQSPDWEKTIVIITSNHGMEFDETQTNSWGSSTNFSE
YQLRVPMLIHWPNVEPELITTTSSHLDLAPTLMEEFLGTTTPANSYSSGINLFDQTEERNWLLAGDRKNIALITGTNTVV
IDTFGNYRVYDENYRRLKDEKPKLSLLMQGISELKRFYHPKK

Specific function: Unknown

COG id: COG3083

COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0842 [H]

Homologues:

Organism=Escherichia coli, GI1788515, Length=600, Percent_Identity=39.3333333333333, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR012159
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 68991; Mature: 68991

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGTRYIAQSPWPETFLGQTYLVLNWIGH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHH
FGFLIFGFYILVLFPLTFITPSQRLMRILSVIIATAGMTLLLLDTYAYQNLHLHITPLVW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCEEEEEHHHHH
DMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKLRKLAHKHVGRPFAITFAIAF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGFIDREALAKQIQNEGTGGA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH
TEAMRYPLEPIAFKTKQKDYNLQIIMIDSLRADTLNHTDTPNLTRFAQNNLNYNNHYSAS
HHHHHCCCCHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
NNPTSLFGLFYGLPGNYVDSFRNSHIESPILTELHARNYQFGLFSGDDFNSSLYKQIIFT
CCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHC
NGEIAQSTEKMNDKKAISQWKDWFGQQTSDKPWFSYLELTSVSEYDDAAPISTSNVSQNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHH
FETNYRKAVQKTDKQLKAVLSTLKQSPDWEKTIVIITSNHGMEFDETQTNSWGSSTNFSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YQLRVPMLIHWPNVEPELITTTSSHLDLAPTLMEEFLGTTTPANSYSSGINLFDQTEERN
EEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
WLLAGDRKNIALITGTNTVVIDTFGNYRVYDENYRRLKDEKPKLSLLMQGISELKRFYHP
EEEECCCCCEEEEECCCEEEEECCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
KK
CC
>Mature Secondary Structure
MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGTRYIAQSPWPETFLGQTYLVLNWIGH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHH
FGFLIFGFYILVLFPLTFITPSQRLMRILSVIIATAGMTLLLLDTYAYQNLHLHITPLVW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCEEEEEHHHHH
DMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKLRKLAHKHVGRPFAITFAIAF
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
IGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGFIDREALAKQIQNEGTGGA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCH
TEAMRYPLEPIAFKTKQKDYNLQIIMIDSLRADTLNHTDTPNLTRFAQNNLNYNNHYSAS
HHHHHCCCCHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
NNPTSLFGLFYGLPGNYVDSFRNSHIESPILTELHARNYQFGLFSGDDFNSSLYKQIIFT
CCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHC
NGEIAQSTEKMNDKKAISQWKDWFGQQTSDKPWFSYLELTSVSEYDDAAPISTSNVSQNL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHH
FETNYRKAVQKTDKQLKAVLSTLKQSPDWEKTIVIITSNHGMEFDETQTNSWGSSTNFSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YQLRVPMLIHWPNVEPELITTTSSHLDLAPTLMEEFLGTTTPANSYSSGINLFDQTEERN
EEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
WLLAGDRKNIALITGTNTVVIDTFGNYRVYDENYRRLKDEKPKLSLLMQGISELKRFYHP
EEEECCCCCEEEEECCCEEEEECCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]