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The map label for this gene is ychJ [C]

Identifier: 59712211

GI number: 59712211

Start: 1799858

End: 1800256

Strand: Direct

Name: ychJ [C]

Synonym: VF_1604

Alternate gene names: 59712211

Gene position: 1799858-1800256 (Clockwise)

Preceding gene: 59712210

Following gene: 59712213

Centisome position: 62.12

GC content: 34.84

Gene sequence:

>399_bases
ATGTCAAAATCAAATCATTGCCCTTGCGGTACAAAAAAAAATTATTCTGTTTGTTGTGAGCCTATTCATAACAATCATTC
ACTAGCGATAACGCCTGAACTTTTAATGCGTTCTCGTTACAGTGCTCATGTTAAAAAATTAGTGCAATATATTATTGATA
CCTACCACCCTTCTTGTAATGCGGAAGAGTTTAGAGAAGGTATTATTGACTCTGTAGAGTTAGATTGGCGTAAACTTAAA
GTTATCGCTTCTTCATTATCAAAAGAAAATGCTAATGAGGGTTTTGTGACATTTAAAGCGACCTATTCAGAAGATGGCCA
ACTGCATCAATTAAAAGAATGCTCTCGCTTTGTCAAAGAAGATGGTAAGTGGTTCTATATTGATGGTGATGTAGAGTAA

Upstream 100 bases:

>100_bases
ATGTTGTCGATCTCTAAATATTACAGAAAAAGAATTTACCGCTTGTTATAAAGAATCTGCCAAATGGGTAGATGAGATAG
CAAAATAGAGACGTCTGAAT

Downstream 100 bases:

>100_bases
AAGACATAAAAAAAACGAGAGCGCTTGCTCTCGTTTTTTATTTTCAATACTAATTCTTAAATTAGAATTTTTTCGATATC
AGTGCAGCACCTGCAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKSNHCPCGTKKNYSVCCEPIHNNHSLAITPELLMRSRYSAHVKKLVQYIIDTYHPSCNAEEFREGIIDSVELDWRKLK
VIASSLSKENANEGFVTFKATYSEDGQLHQLKECSRFVKEDGKWFYIDGDVE

Sequences:

>Translated_132_residues
MSKSNHCPCGTKKNYSVCCEPIHNNHSLAITPELLMRSRYSAHVKKLVQYIIDTYHPSCNAEEFREGIIDSVELDWRKLK
VIASSLSKENANEGFVTFKATYSEDGQLHQLKECSRFVKEDGKWFYIDGDVE
>Mature_131_residues
SKSNHCPCGTKKNYSVCCEPIHNNHSLAITPELLMRSRYSAHVKKLVQYIIDTYHPSCNAEEFREGIIDSVELDWRKLKV
IASSLSKENANEGFVTFKATYSEDGQLHQLKECSRFVKEDGKWFYIDGDVE

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=127, Percent_Identity=41.7322834645669, Blast_Score=105, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 15178; Mature: 15047

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSNHCPCGTKKNYSVCCEPIHNNHSLAITPELLMRSRYSAHVKKLVQYIIDTYHPSCN
CCCCCCCCCCCCCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEEFREGIIDSVELDWRKLKVIASSLSKENANEGFVTFKATYSEDGQLHQLKECSRFVKE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC
DGKWFYIDGDVE
CCCEEEEECCCC
>Mature Secondary Structure 
SKSNHCPCGTKKNYSVCCEPIHNNHSLAITPELLMRSRYSAHVKKLVQYIIDTYHPSCN
CCCCCCCCCCCCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEEFREGIIDSVELDWRKLKVIASSLSKENANEGFVTFKATYSEDGQLHQLKECSRFVKE
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHC
DGKWFYIDGDVE
CCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA