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The map label for this gene is torR [H]

Identifier: 59712177

GI number: 59712177

Start: 1759102

End: 1759800

Strand: Reverse

Name: torR [H]

Synonym: VF_1570

Alternate gene names: 59712177

Gene position: 1759800-1759102 (Counterclockwise)

Preceding gene: 59712181

Following gene: 59712176

Centisome position: 60.73

GC content: 38.48

Gene sequence:

>699_bases
ATGAGCTATCACATTTTAGTTGTTGAAGACGAAGTGGTAACTCGCTCTAAACTTGTAGGCTACTTTGAAGCCGAGGGATA
TCAAGTGAGCGAGGCTGAAACAGGTGCAGAAATGCGTTCTATTTTAGCTGAACAAAAAGTTGATTTAATTATGCTTGATA
TAAACCTACCAGGAGAGGACGGTTTATTGTTGGCGCGTGAATTACGTAGCCAATCCAATATTGGTATTATTTTAGTAACA
GGACGTACAGATAGTATTGATCGAATCGTTGGCCTAGAGATGGGTGCTGACGATTACGTAACGAAACCAGTTGAGTTACG
TGAATTACTTGTACGCGTTAAAAATCTATTTTGGCGTATGTCACTTGCAAACGAGCCAGTTGAGTTAGATGAGTCTAACG
TTGTTCGTTTTGGTGAATGGACATTTGATATTCAACGTAGAGCATTATCAAATAACGGTGAACCAGTTAAATTAACTAAA
GCCGAATATGAATTGTTAGTTGCGTTGTCTTCTTACCCTAATACGGTTTTATCACGTGAACGTATTTTAAATATGATCAG
CCATCGTGTTGATGCACCAAATGATAGAACAATTGACGTATTAATTAGACGTATGAGAGCAAAGATGGAAGTGGATCCTA
AAAACCCACAAATCTTTGTTACTGTTCACGGTGAAGGTTACATGTTCGCAGGTGACTAA

Upstream 100 bases:

>100_bases
AAATAAAATACAGAAATATCAATTGAGAATTGGCATTATTACAGATTATGAATAGAATAAGATAAGAACTATCCAAATAA
CCAAAAATAAAGAGAAGATT

Downstream 100 bases:

>100_bases
TTTTAATTAATATAGTTAATTTTTTGATTTGGCCGCTCATACTATGAGCGGCTTTTTTATGCCTGAATTTTATGTTTTGT
TTTTTTACATACGTAATGCT

Product: DNA-binding transcriptional regulator TorR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVT
GRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNVVRFGEWTFDIQRRALSNNGEPVKLTK
AEYELLVALSSYPNTVLSRERILNMISHRVDAPNDRTIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD

Sequences:

>Translated_232_residues
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVT
GRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNVVRFGEWTFDIQRRALSNNGEPVKLTK
AEYELLVALSSYPNTVLSRERILNMISHRVDAPNDRTIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
>Mature_231_residues
SYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLIMLDINLPGEDGLLLARELRSQSNIGIILVTG
RTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRMSLANEPVELDESNVVRFGEWTFDIQRRALSNNGEPVKLTKA
EYELLVALSSYPNTVLSRERILNMISHRVDAPNDRTIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Phosphorylated torR activates the transcription of the torCAD operon by binding to four decameric boxes located in the torCAD p

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=56.6523605150215, Blast_Score=268, Evalue=3e-73,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=47.6190476190476, Blast_Score=223, Evalue=6e-60,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=40.5982905982906, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=37.280701754386, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=35.1931330472103, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=34.070796460177, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=35.5263157894737, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=31.5789473684211, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=32.3144104803493, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=30.3964757709251, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=32.3008849557522, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=30.9734513274336, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=30.2325581395349, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26342; Mature: 26210

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLIMLDINLPGED
CCEEEEEEECCHHHHHHHEEEEECCCEEECCHHCHHHHHHHHHHCCCCEEEEEEECCCCC
GLLLARELRSQSNIGIILVTGRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRM
CEEHHHHHCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEH
SLANEPVELDESNVVRFGEWTFDIQRRALSNNGEPVKLTKAEYELLVALSSYPNTVLSRE
HCCCCCCCCCCCCEEEECCEEHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHH
RILNMISHRVDAPNDRTIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure 
SYHILVVEDEVVTRSKLVGYFEAEGYQVSEAETGAEMRSILAEQKVDLIMLDINLPGED
CEEEEEEECCHHHHHHHEEEEECCCEEECCHHCHHHHHHHHHHCCCCEEEEEEECCCCC
GLLLARELRSQSNIGIILVTGRTDSIDRIVGLEMGADDYVTKPVELRELLVRVKNLFWRM
CEEHHHHHCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEH
SLANEPVELDESNVVRFGEWTFDIQRRALSNNGEPVKLTKAEYELLVALSSYPNTVLSRE
HCCCCCCCCCCCCEEEECCEEHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCHHHHHH
RILNMISHRVDAPNDRTIDVLIRRMRAKMEVDPKNPQIFVTVHGEGYMFAGD
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]