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The map label for this gene is 59712173

Identifier: 59712173

GI number: 59712173

Start: 1752395

End: 1752946

Strand: Reverse

Name: 59712173

Synonym: VF_1566

Alternate gene names: NA

Gene position: 1752946-1752395 (Counterclockwise)

Preceding gene: 59712174

Following gene: 59712172

Centisome position: 60.5

GC content: 36.59

Gene sequence:

>552_bases
ATGAACCTTTCTGCTAAAACTGTTGTTGTTATTGCTATAGGCGCTGCGCTATATGGTATTGGTGGTTTACCAATGTTTGG
TATTCCAGTCTTCGCAAACACAACATTAAAACCCGCTATGGCTGTGCTAGCACTATTCTCTGTGCTATATGGTCCAATCG
TAGGCTTTCTGGTTGGTTTTATCGGTCACTGGGTGACTGATCTATTTGCAGGTTGGGGCGTTTGGCTTACATGGGTATTA
GGCTCGGGTATTGTTGGTATGATTATTGGTTTATTTCCAATCATTACCAAGAATAGAATTGAATCGGGTTTATTTGATAA
GAAAGACTTCTTAATTTTTGTTGTATTAGCTTTTTTCGGCAATGTGTTCGGTTATGGTACTTCTGCATTCTTAGATACTA
TTTTATATGCAGAACCATTTACAAAAGTATTTATGCAACTGTGTATTATTGCAGCAGGTAATACGTTCTTAATCGCAATT
GTTGGCTATTTTATTTTAAACAATTTAGCGAAGCGTAAAAAACAAAGTACTAATTTAACAGAGGCGCCATAA

Upstream 100 bases:

>100_bases
ATATAGCCGTCTAGATGTAAACATTTCCAAACCGAGTGAGTTACTGTATAATGCGCGCCTTTCTTTCCTATAATCTCACT
TTTGCTTCAAGGCGAACACT

Downstream 100 bases:

>100_bases
TTAATGAGCGTAACCTTTTCTAATTTCTCTTTTCGATATGCGTCACAGGATAAACCGACGCTGAAAAATATTAATCTAAG
GATAGAGCAAGGTGAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNLSAKTVVVIAIGAALYGIGGLPMFGIPVFANTTLKPAMAVLALFSVLYGPIVGFLVGFIGHWVTDLFAGWGVWLTWVL
GSGIVGMIIGLFPIITKNRIESGLFDKKDFLIFVVLAFFGNVFGYGTSAFLDTILYAEPFTKVFMQLCIIAAGNTFLIAI
VGYFILNNLAKRKKQSTNLTEAP

Sequences:

>Translated_183_residues
MNLSAKTVVVIAIGAALYGIGGLPMFGIPVFANTTLKPAMAVLALFSVLYGPIVGFLVGFIGHWVTDLFAGWGVWLTWVL
GSGIVGMIIGLFPIITKNRIESGLFDKKDFLIFVVLAFFGNVFGYGTSAFLDTILYAEPFTKVFMQLCIIAAGNTFLIAI
VGYFILNNLAKRKKQSTNLTEAP
>Mature_183_residues
MNLSAKTVVVIAIGAALYGIGGLPMFGIPVFANTTLKPAMAVLALFSVLYGPIVGFLVGFIGHWVTDLFAGWGVWLTWVL
GSGIVGMIIGLFPIITKNRIESGLFDKKDFLIFVVLAFFGNVFGYGTSAFLDTILYAEPFTKVFMQLCIIAAGNTFLIAI
VGYFILNNLAKRKKQSTNLTEAP

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0397 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1566_VIBF1 (Q5E4I5)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_204949.1
- STRING:   Q5E4I5
- GeneID:   3278832
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1566
- NMPDR:   fig|312309.3.peg.1566
- eggNOG:   COG4720
- HOGENOM:   HBG625988
- OMA:   EPANKVF
- ProtClustDB:   PRK13661
- BioCyc:   VFIS312309:VF1566-MONOMER
- HAMAP:   MF_01572
- InterPro:   IPR009825
- InterPro:   IPR022914

Pfam domain/function: PF07155 DUF1393

EC number: NA

Molecular weight: Translated: 19754; Mature: 19754

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1031a2a0)-; HASH(0x11c86868)-; HASH(0x10fa58e8)-; HASH(0xb515168)-; HASH(0x116cc168)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSAKTVVVIAIGAALYGIGGLPMFGIPVFANTTLKPAMAVLALFSVLYGPIVGFLVGF
CCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGHWVTDLFAGWGVWLTWVLGSGIVGMIIGLFPIITKNRIESGLFDKKDFLIFVVLAFFG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NVFGYGTSAFLDTILYAEPFTKVFMQLCIIAAGNTFLIAIVGYFILNNLAKRKKQSTNLT
HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EAP
CCH
>Mature Secondary Structure
MNLSAKTVVVIAIGAALYGIGGLPMFGIPVFANTTLKPAMAVLALFSVLYGPIVGFLVGF
CCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGHWVTDLFAGWGVWLTWVLGSGIVGMIIGLFPIITKNRIESGLFDKKDFLIFVVLAFFG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NVFGYGTSAFLDTILYAEPFTKVFMQLCIIAAGNTFLIAIVGYFILNNLAKRKKQSTNLT
HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EAP
CCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA