| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712131
Identifier: 59712131
GI number: 59712131
Start: 1703685
End: 1705277
Strand: Reverse
Name: 59712131
Synonym: VF_1524
Alternate gene names: NA
Gene position: 1705277-1703685 (Counterclockwise)
Preceding gene: 59712132
Following gene: 59712130
Centisome position: 58.85
GC content: 32.39
Gene sequence:
>1593_bases ATGAGCAGTGCCGAATTAATTAGACGTATTCCGCAAATGAATGTTTTAGTGTTTACTGAAAAACGTGAACGCAGTACTCA AATTCGTCAATTTTTTCAAAAAGCGGGTTTTAAAAGCGCGGATAATTTTAATCTTGGCATGAAAGCATCAGATCTACCTG TCTATGATTATTATTTTATTGAATATCATTACTCTTCGCATGAAGTAATTGCTGAAATTGTAGATAACGCACGAGCGAAT GCTAAGTTTGGTAAGCGACCTATTTTTATTGTTGATATTGAAAATGAAGATTCTCAAGTTGATGATTTAAATGCTAGGGA GTTATTTCCTGATTTTATTGTTAATAGTCCTATCAATTATGGATATATTGATGAATTAATTAAAAAGTCATTTAACTTAA CATTATTGATCGAAAAACTCATTGCGGAAGTAAAAGGGTCACAAGCTGCTTTTATCAAGCGAGCACAAACGTTTACTGGC ACATATAAAAATAGAATGCTGTTAAACATGACGTTGGAAGAACTGTATAAAGCAAAAGACTTTATGACGTTCAAAAAGGT TTATCAACGTCATGATAAAAGCGAAATCATGCCACAAAACTTAATGGCGTATTGCCAAATGGTTGAAAAGCCAAAAGCAA TACCTGTTCTTGAGTTGTTATTGCGTTCTAAGAAGTATTTATTTAAAGCTAATTTAATGTTGGCGGAAATATATGAAGAA GCAAAACAAAAAAGTAAGCAGCAAGCGTCGTTATCAAAAGCGTTTGAGAATAATCCAAAAAGTGATAGTGCTTTTTATTC GTATTTAACATTTATTATTGAGAATAATGAGCATTCTCTTATTCATAATATGATAATGAAACGTTTTTATCATATTGGTA TTACACCAGTAACATTAAACAAAATGATTTTGGATATTGCTGATACGGTATATAAATCGAATCATCAGTTTAATAAAGAA AAATATCGACGCTTTTTTGGTCAATTAGTTATAACGTTGAAAAAACGTGTATCAATGGATAAGCGTGATGAATTGCAAGG TTATATTAATATCTTTATAGCGCGACAATTGTTTAAACAAGGTAAGCGTTATAAAGCAAAAGCAATTGCAGCAACTTGTT ATCATCGATTCTTATCTGAGCGTAAAGTGGCTTCAGATGAATTTCGTGTTGCTACATTTGGTGTTTTAGCTATGGCTGGC GAAGTGAAGTTGTGTGTTGCTTTATATAAAGTGTTTGATCAAGCGAACCTCAAAAAGAATTCGCCACAGTTACTACAACA GTCGATGGTGCATTTTCAAAAACTAAATAAAGTGTACCAATGGCTTAGAGCTCAAAAATCTGCAGATGAAAACAGACTTC AGTTGATCAAGATAGGACAGACGTATCCGTATTCATCAGATTTAAACTATATGCTTCTTACTTTAACGCTGAAAGGTAAG AATTTAATGAAAAACCCAGAGAATATTAAACAGTGTCTAGCTATTATTCATAGAATGGAGCGCACAAATAACACTGCTGG GTATGAAAACGTAATGTCTTCTGTTGAACAAAATAAGAAAATATTGATCGACGTTTTGTTAGGTAGTGCATAA
Upstream 100 bases:
>100_bases AAATGCAAACGGACTGTGTTGTGTTTGTTAAAACTATTGTAATTTGATTTTTACAGGTTGGTATATTGTGTTTGTTGTTT TCATTAGAGTTGTAATATAA
Downstream 100 bases:
>100_bases TTTTTTACTTCTTTTATGCTCAATAGGTTTTATCCATCACAGAGATAGGAAAGAGCGATTTAGCAATTTTTCAAAAATAG TCCACACTTAAGTTATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MSSAELIRRIPQMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNLGMKASDLPVYDYYFIEYHYSSHEVIAEIVDNARAN AKFGKRPIFIVDIENEDSQVDDLNARELFPDFIVNSPINYGYIDELIKKSFNLTLLIEKLIAEVKGSQAAFIKRAQTFTG TYKNRMLLNMTLEELYKAKDFMTFKKVYQRHDKSEIMPQNLMAYCQMVEKPKAIPVLELLLRSKKYLFKANLMLAEIYEE AKQKSKQQASLSKAFENNPKSDSAFYSYLTFIIENNEHSLIHNMIMKRFYHIGITPVTLNKMILDIADTVYKSNHQFNKE KYRRFFGQLVITLKKRVSMDKRDELQGYINIFIARQLFKQGKRYKAKAIAATCYHRFLSERKVASDEFRVATFGVLAMAG EVKLCVALYKVFDQANLKKNSPQLLQQSMVHFQKLNKVYQWLRAQKSADENRLQLIKIGQTYPYSSDLNYMLLTLTLKGK NLMKNPENIKQCLAIIHRMERTNNTAGYENVMSSVEQNKKILIDVLLGSA
Sequences:
>Translated_530_residues MSSAELIRRIPQMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNLGMKASDLPVYDYYFIEYHYSSHEVIAEIVDNARAN AKFGKRPIFIVDIENEDSQVDDLNARELFPDFIVNSPINYGYIDELIKKSFNLTLLIEKLIAEVKGSQAAFIKRAQTFTG TYKNRMLLNMTLEELYKAKDFMTFKKVYQRHDKSEIMPQNLMAYCQMVEKPKAIPVLELLLRSKKYLFKANLMLAEIYEE AKQKSKQQASLSKAFENNPKSDSAFYSYLTFIIENNEHSLIHNMIMKRFYHIGITPVTLNKMILDIADTVYKSNHQFNKE KYRRFFGQLVITLKKRVSMDKRDELQGYINIFIARQLFKQGKRYKAKAIAATCYHRFLSERKVASDEFRVATFGVLAMAG EVKLCVALYKVFDQANLKKNSPQLLQQSMVHFQKLNKVYQWLRAQKSADENRLQLIKIGQTYPYSSDLNYMLLTLTLKGK NLMKNPENIKQCLAIIHRMERTNNTAGYENVMSSVEQNKKILIDVLLGSA >Mature_529_residues SSAELIRRIPQMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNLGMKASDLPVYDYYFIEYHYSSHEVIAEIVDNARANA KFGKRPIFIVDIENEDSQVDDLNARELFPDFIVNSPINYGYIDELIKKSFNLTLLIEKLIAEVKGSQAAFIKRAQTFTGT YKNRMLLNMTLEELYKAKDFMTFKKVYQRHDKSEIMPQNLMAYCQMVEKPKAIPVLELLLRSKKYLFKANLMLAEIYEEA KQKSKQQASLSKAFENNPKSDSAFYSYLTFIIENNEHSLIHNMIMKRFYHIGITPVTLNKMILDIADTVYKSNHQFNKEK YRRFFGQLVITLKKRVSMDKRDELQGYINIFIARQLFKQGKRYKAKAIAATCYHRFLSERKVASDEFRVATFGVLAMAGE VKLCVALYKVFDQANLKKNSPQLLQQSMVHFQKLNKVYQWLRAQKSADENRLQLIKIGQTYPYSSDLNYMLLTLTLKGKN LMKNPENIKQCLAIIHRMERTNNTAGYENVMSSVEQNKKILIDVLLGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61762; Mature: 61630
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAELIRRIPQMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNLGMKASDLPVYDYYFI CCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE EYHYSSHEVIAEIVDNARANAKFGKRPIFIVDIENEDSQVDDLNARELFPDFIVNSPINY EEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCHHHHHCCCCCC GYIDELIKKSFNLTLLIEKLIAEVKGSQAAFIKRAQTFTGTYKNRMLLNMTLEELYKAKD HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH FMTFKKVYQRHDKSEIMPQNLMAYCQMVEKPKAIPVLELLLRSKKYLFKANLMLAEIYEE HHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKQKSKQQASLSKAFENNPKSDSAFYSYLTFIIENNEHSLIHNMIMKRFYHIGITPVTLN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCHHHHH KMILDIADTVYKSNHQFNKEKYRRFFGQLVITLKKRVSMDKRDELQGYINIFIARQLFKQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GKRYKAKAIAATCYHRFLSERKVASDEFRVATFGVLAMAGEVKLCVALYKVFDQANLKKN CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC SPQLLQQSMVHFQKLNKVYQWLRAQKSADENRLQLIKIGQTYPYSSDLNYMLLTLTLKGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC NLMKNPENIKQCLAIIHRMERTNNTAGYENVMSSVEQNKKILIDVLLGSA HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCC >Mature Secondary Structure SSAELIRRIPQMNVLVFTEKRERSTQIRQFFQKAGFKSADNFNLGMKASDLPVYDYYFI CHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE EYHYSSHEVIAEIVDNARANAKFGKRPIFIVDIENEDSQVDDLNARELFPDFIVNSPINY EEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCHHHHHCCCCCC GYIDELIKKSFNLTLLIEKLIAEVKGSQAAFIKRAQTFTGTYKNRMLLNMTLEELYKAKD HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHH FMTFKKVYQRHDKSEIMPQNLMAYCQMVEKPKAIPVLELLLRSKKYLFKANLMLAEIYEE HHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKQKSKQQASLSKAFENNPKSDSAFYSYLTFIIENNEHSLIHNMIMKRFYHIGITPVTLN HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCHHHHH KMILDIADTVYKSNHQFNKEKYRRFFGQLVITLKKRVSMDKRDELQGYINIFIARQLFKQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GKRYKAKAIAATCYHRFLSERKVASDEFRVATFGVLAMAGEVKLCVALYKVFDQANLKKN CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC SPQLLQQSMVHFQKLNKVYQWLRAQKSADENRLQLIKIGQTYPYSSDLNYMLLTLTLKGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCC NLMKNPENIKQCLAIIHRMERTNNTAGYENVMSSVEQNKKILIDVLLGSA HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA