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The map label for this gene is 59712130

Identifier: 59712130

GI number: 59712130

Start: 1703140

End: 1703556

Strand: Reverse

Name: 59712130

Synonym: VF_1523

Alternate gene names: NA

Gene position: 1703556-1703140 (Counterclockwise)

Preceding gene: 59712131

Following gene: 59712129

Centisome position: 58.79

GC content: 37.41

Gene sequence:

>417_bases
ATGGAAAATAAAAAAGTAAAACAATACATGAGTGTACGACCTCTATATTTGACAGCGGATATGTCATTAGCAGCGGCGTT
AGATCAATTTATTACTTCACAACATATTGGTGGTCCAGTTGTTAATGAGCAACGTGAAGTTATTGGGTTTATTTCTGAGC
AAGATTTAATTAAGTCTTTGCTAGGGGTGAGTTATCATTGTCAAGATACGCACGTTGTAGCAGATGTGATGAAGACAGAA
GTGTTAACTGTTACACCTGATGATGCGATTGTTGATTTGGCACAGACAATGACAGACAATAAACCTAAAATTTACCCAGT
GGTTGAAGATGGTAAGCTGGTTGGGATCATTACTCGACGTAATGTTCTTCAGGCTATTAGTGAATCAATAGGTCACTGTT
TTAAACACCCGGTTTAA

Upstream 100 bases:

>100_bases
TTTATCCATCACAGAGATAGGAAAGAGCGATTTAGCAATTTTTCAAAAATAGTCCACACTTAAGTTATCGAAGTAAGCGA
TAGCACGTTAGGGGGCTATA

Downstream 100 bases:

>100_bases
TTTTCATCATCTCTTCTTATAAAAAGACACTTCGGTGTCTTTTTTTGTTTCAAATAAAAAATATTCTTGACCTTGGAGTT
AACTCTAAGGTTTATAGTTA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGGPVVNEQREVIGFISEQDLIKSLLGVSYHCQDTHVVADVMKTE
VLTVTPDDAIVDLAQTMTDNKPKIYPVVEDGKLVGIITRRNVLQAISESIGHCFKHPV

Sequences:

>Translated_138_residues
MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGGPVVNEQREVIGFISEQDLIKSLLGVSYHCQDTHVVADVMKTE
VLTVTPDDAIVDLAQTMTDNKPKIYPVVEDGKLVGIITRRNVLQAISESIGHCFKHPV
>Mature_138_residues
MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGGPVVNEQREVIGFISEQDLIKSLLGVSYHCQDTHVVADVMKTE
VLTVTPDDAIVDLAQTMTDNKPKIYPVVEDGKLVGIITRRNVLQAISESIGHCFKHPV

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15307; Mature: 15307

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGGPVVNEQREVIGFISEQDLIKSL
CCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
LGVSYHCQDTHVVADVMKTEVLTVTPDDAIVDLAQTMTDNKPKIYPVVEDGKLVGIITRR
HCCCCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHH
NVLQAISESIGHCFKHPV
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGGPVVNEQREVIGFISEQDLIKSL
CCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHH
LGVSYHCQDTHVVADVMKTEVLTVTPDDAIVDLAQTMTDNKPKIYPVVEDGKLVGIITRR
HCCCCCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHH
NVLQAISESIGHCFKHPV
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]