| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is grxC1 [H]
Identifier: 59712103
GI number: 59712103
Start: 1655358
End: 1655645
Strand: Reverse
Name: grxC1 [H]
Synonym: VF_1496
Alternate gene names: 59712103
Gene position: 1655645-1655358 (Counterclockwise)
Preceding gene: 59712104
Following gene: 59712102
Centisome position: 57.14
GC content: 32.64
Gene sequence:
>288_bases ATGTTAAATACTCATCAAACGATCATTTTTTCAAAAACAGTATGTCCTTTTTGTGTTAAAGCAAAAGCAATTTTGGACGA TAAAGGCATTGAATATAAAGTATTAACCTTAGATGAAGATCTAACAAAAGAAGAAATGGTTGCTTTAATTCAAGAAAAAG AAAACATTACAGTGAATACCGTTCCTCAAATTTACCTTGACCGTAAATATATCGGTGGACATGACGATTTAGTGGCGTTT TTTGAGCGTCAAGACACCGACATGGATTTAGGTGATTTTGAACTGTAG
Upstream 100 bases:
>100_bases TGAACAACAGCTGCACCAGTTAATTCCTGAACTGCAAGCATACCCAGTTTTCAGCATTTAATTATCGAATTCGTATTATT GAACTTAAAGAGAGCAAAAA
Downstream 100 bases:
>100_bases AATACAGTAAATTAACATAGTTAACCTAAATGCTTTGGGTTTAATGATAAATAAGAGTGATAAATATGTGGAAATCTCTT CTAACATTAGTGGAAGATGA
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLNTHQTIIFSKTVCPFCVKAKAILDDKGIEYKVLTLDEDLTKEEMVALIQEKENITVNTVPQIYLDRKYIGGHDDLVAF FERQDTDMDLGDFEL
Sequences:
>Translated_95_residues MLNTHQTIIFSKTVCPFCVKAKAILDDKGIEYKVLTLDEDLTKEEMVALIQEKENITVNTVPQIYLDRKYIGGHDDLVAF FERQDTDMDLGDFEL >Mature_95_residues MLNTHQTIIFSKTVCPFCVKAKAILDDKGIEYKVLTLDEDLTKEEMVALIQEKENITVNTVPQIYLDRKYIGGHDDLVAF FERQDTDMDLGDFEL
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=80, Percent_Identity=40, Blast_Score=63, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 10943; Mature: 10943
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTHQTIIFSKTVCPFCVKAKAILDDKGIEYKVLTLDEDLTKEEMVALIQEKENITVNT CCCCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEC VPQIYLDRKYIGGHDDLVAFFERQDTDMDLGDFEL CCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLNTHQTIIFSKTVCPFCVKAKAILDDKGIEYKVLTLDEDLTKEEMVALIQEKENITVNT CCCCCCEEEEECCCCCHHHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEC VPQIYLDRKYIGGHDDLVAFFERQDTDMDLGDFEL CCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA