| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712075
Identifier: 59712075
GI number: 59712075
Start: 1626802
End: 1627437
Strand: Reverse
Name: 59712075
Synonym: VF_1468
Alternate gene names: NA
Gene position: 1627437-1626802 (Counterclockwise)
Preceding gene: 59712078
Following gene: 59712070
Centisome position: 56.17
GC content: 35.53
Gene sequence:
>636_bases ATGCTGAAGAAAATCTTGTTGGGTATTGTTGCTGTTAGTTTGTTAATAGCAGCTGCTGGCGTTTATCGTTTCAATTTTAC GAATGATGATATTTATGTAGTGGATGCAGAAAGTAGCTTAGATACAGAGAATAATGTGATGTTGACGTTATTTAGTATTA ATACCGACGACTACTGGCAGATCCAATTGCCTAATTCTAAAGCCAAAGCTTCTCTGACAGAACTGAGAGAATATGATGAT CTTCATTTGGCTACCGGAAAATATCAAAATGGTGAGGAACGTGGTTCAGTCGGTTTAGATTACTACAAAATCACGCCTTT AAATCTTGGCAATATTGACGATGAGATGATTTTCTCTGTGCCATTTTTTGTATCAAATCAAGGAACAGGCGTATTTTGGT ATTTAGGGTTATTTAAATTAAATACAGAGACAGGCGAGATTGGTCAAATAGACACCTTCTTTCTTGGAGACAGAATAAAA GTAGATGAATTGAAAACAGAGGAACCATTTGATGTCACTTCTAGCCTTCATATCACTTTCCTTAAGCATAATCAGCAGCA AAGTATGGCCGAGACACCAAGTGAAAAAGTAGATCAGTATATAAAAGTTTCTATTGAAGGCTTTCAGAATAAATAA
Upstream 100 bases:
>100_bases CGTTAGCTTATGTAAAGGTGTTCACCGTGAGGTGGCTTTTGAGCCTAGCTAACGTTATTGTGATGATATTTTTAATTATC TCTAAATCGTAGGGGCACTC
Downstream 100 bases:
>100_bases TGTTAAGAAAACAGATATAAAAAAGGGCGTATGAGTTTCCTCAATACGCCCTGAATTTTCTTATTAATGTCTAGGTGACT TTAGTGTTGAGTAAGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLKKILLGIVAVSLLIAAAGVYRFNFTNDDIYVVDAESSLDTENNVMLTLFSINTDDYWQIQLPNSKAKASLTELREYDD LHLATGKYQNGEERGSVGLDYYKITPLNLGNIDDEMIFSVPFFVSNQGTGVFWYLGLFKLNTETGEIGQIDTFFLGDRIK VDELKTEEPFDVTSSLHITFLKHNQQQSMAETPSEKVDQYIKVSIEGFQNK
Sequences:
>Translated_211_residues MLKKILLGIVAVSLLIAAAGVYRFNFTNDDIYVVDAESSLDTENNVMLTLFSINTDDYWQIQLPNSKAKASLTELREYDD LHLATGKYQNGEERGSVGLDYYKITPLNLGNIDDEMIFSVPFFVSNQGTGVFWYLGLFKLNTETGEIGQIDTFFLGDRIK VDELKTEEPFDVTSSLHITFLKHNQQQSMAETPSEKVDQYIKVSIEGFQNK >Mature_211_residues MLKKILLGIVAVSLLIAAAGVYRFNFTNDDIYVVDAESSLDTENNVMLTLFSINTDDYWQIQLPNSKAKASLTELREYDD LHLATGKYQNGEERGSVGLDYYKITPLNLGNIDDEMIFSVPFFVSNQGTGVFWYLGLFKLNTETGEIGQIDTFFLGDRIK VDELKTEEPFDVTSSLHITFLKHNQQQSMAETPSEKVDQYIKVSIEGFQNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23890; Mature: 23890
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKILLGIVAVSLLIAAAGVYRFNFTNDDIYVVDAESSLDTENNVMLTLFSINTDDYWQ CHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEE IQLPNSKAKASLTELREYDDLHLATGKYQNGEERGSVGLDYYKITPLNLGNIDDEMIFSV EECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE PFFVSNQGTGVFWYLGLFKLNTETGEIGQIDTFFLGDRIKVDELKTEEPFDVTSSLHITF CEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEEE LKHNQQQSMAETPSEKVDQYIKVSIEGFQNK EECCCHHHHHCCCHHHHHHEEEEEEECCCCC >Mature Secondary Structure MLKKILLGIVAVSLLIAAAGVYRFNFTNDDIYVVDAESSLDTENNVMLTLFSINTDDYWQ CHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEE IQLPNSKAKASLTELREYDDLHLATGKYQNGEERGSVGLDYYKITPLNLGNIDDEMIFSV EECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE PFFVSNQGTGVFWYLGLFKLNTETGEIGQIDTFFLGDRIKVDELKTEEPFDVTSSLHITF CEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEEEEE LKHNQQQSMAETPSEKVDQYIKVSIEGFQNK EECCCHHHHHCCCHHHHHHEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA