| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712069
Identifier: 59712069
GI number: 59712069
Start: 1619203
End: 1619667
Strand: Reverse
Name: 59712069
Synonym: VF_1462
Alternate gene names: NA
Gene position: 1619667-1619203 (Counterclockwise)
Preceding gene: 59712070
Following gene: 59712068
Centisome position: 55.9
GC content: 34.19
Gene sequence:
>465_bases ATGAGTAGTATTGTCGATGCTTTGTACGAATTAAAATACAATCCATTTGAATATAGTTCTTACTTAGCTTCTTTTTATAC TGCAATTGACGAGTCTGAAAATAATCTTTTGTTTGCTCCTTTGGTCATCCCATTGTGTAGTCATCCTGATTTTCGGAAAA AAATTTCGGGAGCTGTATTTGGAGATAAAAGACGAAGTTCTATTTGGTCAATTTTCGAAGACCGTTCCAAATTCTACGAT TTGCAGGAGCGAATTGATGGATTTCAAACCTTAACTGAACAGTGTATTCAATATTGCTTAGTCAATGATTGGTTATTGGT AGATGAAGAAGATTTATCTATTCGTAAAAGTGAATGTTCTGATGTAGCTTTTATCTATCAAAAAAGTGCAGAAAAGTTAG GGCGATTATTTTGTGGGCACTCAGTGGTTGAGGTTTATGCATTTTTAGGAGTAAAACCACGATGA
Upstream 100 bases:
>100_bases TGAATATGGGTAATGATATTCCTCCAATTGAATACAAAAATGGTTTGCTACATGACGCAATGGATGATGAATCTCGAAAT TTGAAATGGAAGGTTGAGAT
Downstream 100 bases:
>100_bases ATACACTTATTCATGAAATTGGGGTTATTGATAAACAAGGTAAAAAACACCCTGTTAATTTTAAGGTTGGGCTTAACGTT GTTACAGGTAAATCCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSSIVDALYELKYNPFEYSSYLASFYTAIDESENNLLFAPLVIPLCSHPDFRKKISGAVFGDKRRSSIWSIFEDRSKFYD LQERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSIRKSECSDVAFIYQKSAEKLGRLFCGHSVVEVYAFLGVKPR
Sequences:
>Translated_154_residues MSSIVDALYELKYNPFEYSSYLASFYTAIDESENNLLFAPLVIPLCSHPDFRKKISGAVFGDKRRSSIWSIFEDRSKFYD LQERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSIRKSECSDVAFIYQKSAEKLGRLFCGHSVVEVYAFLGVKPR >Mature_153_residues SSIVDALYELKYNPFEYSSYLASFYTAIDESENNLLFAPLVIPLCSHPDFRKKISGAVFGDKRRSSIWSIFEDRSKFYDL QERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSIRKSECSDVAFIYQKSAEKLGRLFCGHSVVEVYAFLGVKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17828; Mature: 17697
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIVDALYELKYNPFEYSSYLASFYTAIDESENNLLFAPLVIPLCSHPDFRKKISGAVF CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCHHHHHCCCCC GDKRRSSIWSIFEDRSKFYDLQERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSIRKSECS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHH DVAFIYQKSAEKLGRLFCGHSVVEVYAFLGVKPR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC >Mature Secondary Structure SSIVDALYELKYNPFEYSSYLASFYTAIDESENNLLFAPLVIPLCSHPDFRKKISGAVF HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCHHHHHCCCCC GDKRRSSIWSIFEDRSKFYDLQERIDGFQTLTEQCIQYCLVNDWLLVDEEDLSIRKSECS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHH DVAFIYQKSAEKLGRLFCGHSVVEVYAFLGVKPR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA