| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712060
Identifier: 59712060
GI number: 59712060
Start: 1606568
End: 1607314
Strand: Reverse
Name: 59712060
Synonym: VF_1453
Alternate gene names: NA
Gene position: 1607314-1606568 (Counterclockwise)
Preceding gene: 172087711
Following gene: 59712059
Centisome position: 55.47
GC content: 36.95
Gene sequence:
>747_bases GTGAGTGTAGAAAATCAAACAAGAACATCTGATGAGCACGATGAAGATGTCATTATTATTGAAGAGAAATCAAAAGCGAG CCATTGGGTAGCAGGGGTAACCTTGATTATCGGTGCGGTTGCCGGTGGTTTAATTGGCTCTAGTATTTCAGAAAATAAAT GGACAGAAGCCTACACTCAATTAGAAACTCAAACTAAGCAATATCAATTACAGTTAACTCAAGCAAAAGAGAAGAGTGCT GAGGTTGATGTGCTGGTTGAAAAAGAAAAACAGCAAGCATTAGAAGCACAAAAACAAACGCTTGATGAAGAAAAAGCACA AGCGATTGTTGAAGAATCAAAAAAACATGCGACATTAACAAAAGAAGTGGGTGCATTGAAGTCTCAAAAAGCCTCACTAG AAATGCAAGTTGAAGAGCAAAATAAGCAAATTGATAAATTAACTAACCAAGTTGATTTACAAGTGACGATGCTGACGCGT GCAAAGCAGTTGTTCCAACGTCAACTTCAATTGAAAGAAGAAGCAAGTGCACTTGAAGTTAAACTTGAAGTAACAACATC AAATGAAAAACGTCTTGCGAAAGAGTGTGAAGTGTACCTTGAAGGTAAGAGTTGGGATGTGAAGTCAGATGTTTGCCAAC GTCAAGAAGCAGCAAAAAAACTCATCGCTCAATATAATGATGAATTACAATTGCTACAGATGGATATCAAAGAAATTGAT AGCATTAGTGAAAGCATAGGTATGTAA
Upstream 100 bases:
>100_bases TCATGATTTCAGAGCTAATTCGATAAGTTGTCTTATTTTTAACAAAGAGTATAGGGAATAACACTATACTCAATAAAATC TATTTGCTTGGGGTTATCAC
Downstream 100 bases:
>100_bases TCGTTATTACTTCCACTGTTTGAAGAAAACCACAATTAGTTTGTGGTTTTTTTATTTTTAGGAAATAACGATTTAATTTT TAGTATTCAACACCATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSVENQTRTSDEHDEDVIIIEEKSKASHWVAGVTLIIGAVAGGLIGSSISENKWTEAYTQLETQTKQYQLQLTQAKEKSA EVDVLVEKEKQQALEAQKQTLDEEKAQAIVEESKKHATLTKEVGALKSQKASLEMQVEEQNKQIDKLTNQVDLQVTMLTR AKQLFQRQLQLKEEASALEVKLEVTTSNEKRLAKECEVYLEGKSWDVKSDVCQRQEAAKKLIAQYNDELQLLQMDIKEID SISESIGM
Sequences:
>Translated_248_residues MSVENQTRTSDEHDEDVIIIEEKSKASHWVAGVTLIIGAVAGGLIGSSISENKWTEAYTQLETQTKQYQLQLTQAKEKSA EVDVLVEKEKQQALEAQKQTLDEEKAQAIVEESKKHATLTKEVGALKSQKASLEMQVEEQNKQIDKLTNQVDLQVTMLTR AKQLFQRQLQLKEEASALEVKLEVTTSNEKRLAKECEVYLEGKSWDVKSDVCQRQEAAKKLIAQYNDELQLLQMDIKEID SISESIGM >Mature_247_residues SVENQTRTSDEHDEDVIIIEEKSKASHWVAGVTLIIGAVAGGLIGSSISENKWTEAYTQLETQTKQYQLQLTQAKEKSAE VDVLVEKEKQQALEAQKQTLDEEKAQAIVEESKKHATLTKEVGALKSQKASLEMQVEEQNKQIDKLTNQVDLQVTMLTRA KQLFQRQLQLKEEASALEVKLEVTTSNEKRLAKECEVYLEGKSWDVKSDVCQRQEAAKKLIAQYNDELQLLQMDIKEIDS ISESIGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28010; Mature: 27879
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVENQTRTSDEHDEDVIIIEEKSKASHWVAGVTLIIGAVAGGLIGSSISENKWTEAYTQ CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LETQTKQYQLQLTQAKEKSAEVDVLVEKEKQQALEAQKQTLDEEKAQAIVEESKKHATLT HHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVGALKSQKASLEMQVEEQNKQIDKLTNQVDLQVTMLTRAKQLFQRQLQLKEEASALEV HHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE KLEVTTSNEKRLAKECEVYLEGKSWDVKSDVCQRQEAAKKLIAQYNDELQLLQMDIKEID EEEEECCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SISESIGM HHHHHHCC >Mature Secondary Structure SVENQTRTSDEHDEDVIIIEEKSKASHWVAGVTLIIGAVAGGLIGSSISENKWTEAYTQ CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LETQTKQYQLQLTQAKEKSAEVDVLVEKEKQQALEAQKQTLDEEKAQAIVEESKKHATLT HHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVGALKSQKASLEMQVEEQNKQIDKLTNQVDLQVTMLTRAKQLFQRQLQLKEEASALEV HHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE KLEVTTSNEKRLAKECEVYLEGKSWDVKSDVCQRQEAAKKLIAQYNDELQLLQMDIKEID EEEEECCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SISESIGM HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA