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The map label for this gene is yccF [H]

Identifier: 59712043

GI number: 59712043

Start: 1589020

End: 1589472

Strand: Reverse

Name: yccF [H]

Synonym: VF_1436

Alternate gene names: 59712043

Gene position: 1589472-1589020 (Counterclockwise)

Preceding gene: 172087710

Following gene: 59712042

Centisome position: 54.86

GC content: 41.5

Gene sequence:

>453_bases
ATGAGCGCAATTGGTAATTTAATTTGGTTCCTTTTTGGTGGCGTATTTATGGGGCTAGCATGGTGCTTTTTTGGGATCTT
AGCCTTTATTAGTATTATTGGTATCCCTTGGGGACGAGCGTGTTTTGTTATGGCTGGATTCTCTTTCTTCCCATTTGGTA
AAGAAGCCATTTATCGTGATGAATTAACGCGTTCTGAAGATATTGGTACAGGTAGCCTAGGTTTTATCGGTAATGTTTTA
TGGTTTATCTTTGCTGGCTTCTGGTTGGCACTTGGCCATGTTATGTCTGCTGTTGCGTGTTTTGTTACTATTATTGGTAT
TCCGTTTGCTATTCAACACTTAAAATTGGCCGCGATTTCAATCGCACCTATTGGTCAAACGATTGTAGATAAAGAAGTAG
CAGCGGCGGCTCGTCGTGCAAATGGAGAAGCTGAAGCAAGCAAGTGGCGATAA

Upstream 100 bases:

>100_bases
GATAGAACATATGATGAATGTGCCAAATGTGGTGCAAGTGATTAATCACTCTACGAATTTGTCATTTATTTATAGTAAGA
ATTGTAGTTAAGGAAATAAA

Downstream 100 bases:

>100_bases
CATAATAAGGTAAGGGATAATTTTTAATTAATCGTCTAGTTACTTATTACTTGCTATTGAGACTTTTTTTACTAAAATCG
CGCAACATTTATTCTGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSAIGNLIWFLFGGVFMGLAWCFFGILAFISIIGIPWGRACFVMAGFSFFPFGKEAIYRDELTRSEDIGTGSLGFIGNVL
WFIFAGFWLALGHVMSAVACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVAAAARRANGEAEASKWR

Sequences:

>Translated_150_residues
MSAIGNLIWFLFGGVFMGLAWCFFGILAFISIIGIPWGRACFVMAGFSFFPFGKEAIYRDELTRSEDIGTGSLGFIGNVL
WFIFAGFWLALGHVMSAVACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVAAAARRANGEAEASKWR
>Mature_149_residues
SAIGNLIWFLFGGVFMGLAWCFFGILAFISIIGIPWGRACFVMAGFSFFPFGKEAIYRDELTRSEDIGTGSLGFIGNVLW
FIFAGFWLALGHVMSAVACFVTIIGIPFAIQHLKLAAISIAPIGQTIVDKEVAAAARRANGEAEASKWR

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=133, Percent_Identity=33.8345864661654, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16274; Mature: 16143

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIGNLIWFLFGGVFMGLAWCFFGILAFISIIGIPWGRACFVMAGFSFFPFGKEAIYRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHH
ELTRSEDIGTGSLGFIGNVLWFIFAGFWLALGHVMSAVACFVTIIGIPFAIQHLKLAAIS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPIGQTIVDKEVAAAARRANGEAEASKWR
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SAIGNLIWFLFGGVFMGLAWCFFGILAFISIIGIPWGRACFVMAGFSFFPFGKEAIYRD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHH
ELTRSEDIGTGSLGFIGNVLWFIFAGFWLALGHVMSAVACFVTIIGIPFAIQHLKLAAIS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPIGQTIVDKEVAAAARRANGEAEASKWR
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]