| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is aslA [H]
Identifier: 59712035
GI number: 59712035
Start: 1582251
End: 1583801
Strand: Direct
Name: aslA [H]
Synonym: VF_1428
Alternate gene names: 59712035
Gene position: 1582251-1583801 (Clockwise)
Preceding gene: 59712025
Following gene: 59712036
Centisome position: 54.61
GC content: 41.52
Gene sequence:
>1551_bases ATGAACAAAATAGTAAAAAAAACCGCCATTGCAACAGGCCTTGCTTTATCAGGGATCCAAGTAGCTTATGCTGCTGCTCA ACCGAATATCCTTGTCATTTTTGGTGATGATATTGGTTATGGAAACATCTCTGCTTATAACCAAGGTATGCTCGGCTACC AAACGCCAAATATCGATAGCATTGCAAATGATGGGGCTCTCTTTACGTCTTATTACGGTCAACAATCTTGTACCGCTGGT CGCTCAGCTTTCATCACTGGTCAAATGCCCGTCCGTACAGGTCTAACTAAAGTTGGATTACCAGGAGCAAAACAGGGTTT ACAAGCACAAGACATCACTCTTGCTCAAACTTTAAAAGACCAAGGTTACGTTACTGGTCAATTTGGTAAAAACCACCTTG GTGACCGCGATGACATGCTGCCAACCAACCATGGTTTTGATGAATTTTTTGGTAACCTTTACCACCTAAATGCAGAAGAA GAACCAGAAAATGCAGACTACCCTAAAGACCCAACCTTCCGTAAAAACTTTGGGCCTCGTGGCGTTATTCATTCATACGC AGATGGAAAAATTGAAGATACAGGTCCTCTAACTCGTAAACGCATGGAAACGGTTGATGAAGAAACGATGGATGCGGCGA TGGACTTTATGACCAGAGCAGTAAAAGCAGACAAACCTTTCTTCACTTGGTACAACGCAACTCGAATGCATATCAAAACT CACGTCAAAGCCGAGAATTCAGGAAAAACCGGACTTGGTGATTATGCAGATGGTATGGTTGAACATGACAACATTGTTGG AGACCTACTTGATAAAGTCGATGATCTAGGCATCAGTGATAACACTGTCATCATTTACACAACCGATAACGGTCCAATGA ATGCGACATGGCCTGATGCGGCCTTCAGTCCATTCCGTGGTGAGAAAAATACAGGTTGGGAAGGCGGTTTCCGTGTACCT GCAGTCATTAAATGGCCTGGACACATCAAACCTGGCACAAAACTTAATGGCATGTTTGCTGGTGAAGACTGGCTACCAAC ACTAACAGCAATCGCTGGTAATAAAGACATTAAGCAAGAGCTACTTAAAGGCTACAAAGCGGATAATGGCAAAACGTATA AAAACCATCTAGACGGTTATAACCAAGTTAACTACCTAACAGGTAAATCAAAAGAAAGTGCTCGCCAAGAGTTCTTCTAC TGGTCTGATGATGGTGAATTACTGGCTATGCGTGATGGTCGCTGGAAAATGCACTTCAAGATCCAAGAAAACCAAGGTTG GAAAGTATGGACTCGTGAATTTACAAATCTACGTATTCCTATGATTTTCGATCTACAAGTAGATCCATACGAAAAAGCAG ATCAAGGATTTGGATATGATTCATGGGTTTTTGATCATGTATTTTTGCTAGTCCCTACTCAAGCAAAAGTAGCAAAAATG ATTGAAAGCTTTAAAGAGTTCCCACCACGTCAAGAAATTCCAAGCTTCTCTGTCGACAAAGTAATGGAACAGATGAAAAA CATGGAAAAAGTAGCTAACGCTAGTAAATAA
Upstream 100 bases:
>100_bases TAATAACCAATTTCAGTACATCGTTTTTTCCGTATTTGCAGGATAATGCAGATCCCTTTCCAATATTATCTAGCTGAAAT CATTCCTTCAGGAGATAGCG
Downstream 100 bases:
>100_bases CATGAATAAGATTTAGGGCTCATATGGGCCCTATTTTGCTATTTATAAGATACATAAAGGTGAAACCCATGCAGACAAAT GCAGACTTTACATTTGATGA
Product: sulfatase family protein
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNKIVKKTAIATGLALSGIQVAYAAAQPNILVIFGDDIGYGNISAYNQGMLGYQTPNIDSIANDGALFTSYYGQQSCTAG RSAFITGQMPVRTGLTKVGLPGAKQGLQAQDITLAQTLKDQGYVTGQFGKNHLGDRDDMLPTNHGFDEFFGNLYHLNAEE EPENADYPKDPTFRKNFGPRGVIHSYADGKIEDTGPLTRKRMETVDEETMDAAMDFMTRAVKADKPFFTWYNATRMHIKT HVKAENSGKTGLGDYADGMVEHDNIVGDLLDKVDDLGISDNTVIIYTTDNGPMNATWPDAAFSPFRGEKNTGWEGGFRVP AVIKWPGHIKPGTKLNGMFAGEDWLPTLTAIAGNKDIKQELLKGYKADNGKTYKNHLDGYNQVNYLTGKSKESARQEFFY WSDDGELLAMRDGRWKMHFKIQENQGWKVWTREFTNLRIPMIFDLQVDPYEKADQGFGYDSWVFDHVFLLVPTQAKVAKM IESFKEFPPRQEIPSFSVDKVMEQMKNMEKVANASK
Sequences:
>Translated_516_residues MNKIVKKTAIATGLALSGIQVAYAAAQPNILVIFGDDIGYGNISAYNQGMLGYQTPNIDSIANDGALFTSYYGQQSCTAG RSAFITGQMPVRTGLTKVGLPGAKQGLQAQDITLAQTLKDQGYVTGQFGKNHLGDRDDMLPTNHGFDEFFGNLYHLNAEE EPENADYPKDPTFRKNFGPRGVIHSYADGKIEDTGPLTRKRMETVDEETMDAAMDFMTRAVKADKPFFTWYNATRMHIKT HVKAENSGKTGLGDYADGMVEHDNIVGDLLDKVDDLGISDNTVIIYTTDNGPMNATWPDAAFSPFRGEKNTGWEGGFRVP AVIKWPGHIKPGTKLNGMFAGEDWLPTLTAIAGNKDIKQELLKGYKADNGKTYKNHLDGYNQVNYLTGKSKESARQEFFY WSDDGELLAMRDGRWKMHFKIQENQGWKVWTREFTNLRIPMIFDLQVDPYEKADQGFGYDSWVFDHVFLLVPTQAKVAKM IESFKEFPPRQEIPSFSVDKVMEQMKNMEKVANASK >Mature_516_residues MNKIVKKTAIATGLALSGIQVAYAAAQPNILVIFGDDIGYGNISAYNQGMLGYQTPNIDSIANDGALFTSYYGQQSCTAG RSAFITGQMPVRTGLTKVGLPGAKQGLQAQDITLAQTLKDQGYVTGQFGKNHLGDRDDMLPTNHGFDEFFGNLYHLNAEE EPENADYPKDPTFRKNFGPRGVIHSYADGKIEDTGPLTRKRMETVDEETMDAAMDFMTRAVKADKPFFTWYNATRMHIKT HVKAENSGKTGLGDYADGMVEHDNIVGDLLDKVDDLGISDNTVIIYTTDNGPMNATWPDAAFSPFRGEKNTGWEGGFRVP AVIKWPGHIKPGTKLNGMFAGEDWLPTLTAIAGNKDIKQELLKGYKADNGKTYKNHLDGYNQVNYLTGKSKESARQEFFY WSDDGELLAMRDGRWKMHFKIQENQGWKVWTREFTNLRIPMIFDLQVDPYEKADQGFGYDSWVFDHVFLLVPTQAKVAKM IESFKEFPPRQEIPSFSVDKVMEQMKNMEKVANASK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI146229331, Length=443, Percent_Identity=32.0541760722348, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI146229329, Length=443, Percent_Identity=32.0541760722348, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI6005990, Length=443, Percent_Identity=32.0541760722348, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI146229324, Length=443, Percent_Identity=32.0541760722348, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI4503899, Length=512, Percent_Identity=28.3203125, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI45430057, Length=448, Percent_Identity=27.6785714285714, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI146229327, Length=371, Percent_Identity=29.6495956873315, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI53831991, Length=511, Percent_Identity=25.440313111546, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI157266309, Length=513, Percent_Identity=25.7309941520468, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI58743319, Length=450, Percent_Identity=25.7777777777778, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI31742482, Length=517, Percent_Identity=26.3056092843327, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI38569405, Length=477, Percent_Identity=25.9958071278826, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI38569407, Length=352, Percent_Identity=28.9772727272727, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI59797060, Length=455, Percent_Identity=25.2747252747253, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI109389362, Length=132, Percent_Identity=37.8787878787879, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI71852586, Length=151, Percent_Identity=37.0860927152318, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI71852584, Length=151, Percent_Identity=37.0860927152318, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1790233, Length=493, Percent_Identity=32.0486815415822, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI87081924, Length=389, Percent_Identity=23.9074550128535, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533416, Length=425, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI115533418, Length=406, Percent_Identity=26.8472906403941, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17559078, Length=266, Percent_Identity=27.0676691729323, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI281366397, Length=382, Percent_Identity=27.2251308900524, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI281366395, Length=382, Percent_Identity=27.2251308900524, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24666163, Length=382, Percent_Identity=27.2251308900524, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24666109, Length=419, Percent_Identity=27.2076372315036, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI24666175, Length=371, Percent_Identity=27.4932614555256, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI281363223, Length=459, Percent_Identity=25.9259259259259, Blast_Score=109, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 57723; Mature: 57723
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIVKKTAIATGLALSGIQVAYAAAQPNILVIFGDDIGYGNISAYNQGMLGYQTPNIDS CCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH IANDGALFTSYYGQQSCTAGRSAFITGQMPVRTGLTKVGLPGAKQGLQAQDITLAQTLKD HCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHCCHHCCCCCHHCCCCCCCHHHHHHHHH QGYVTGQFGKNHLGDRDDMLPTNHGFDEFFGNLYHLNAEEEPENADYPKDPTFRKNFGPR CCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC GVIHSYADGKIEDTGPLTRKRMETVDEETMDAAMDFMTRAVKADKPFFTWYNATRMHIKT CCEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEE HVKAENSGKTGLGDYADGMVEHDNIVGDLLDKVDDLGISDNTVIIYTTDNGPMNATWPDA EEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC AFSPFRGEKNTGWEGGFRVPAVIKWPGHIKPGTKLNGMFAGEDWLPTLTAIAGNKDIKQE CCCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHCCCHHHHHH LLKGYKADNGKTYKNHLDGYNQVNYLTGKSKESARQEFFYWSDDGELLAMRDGRWKMHFK HHHHCCCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHCEEECCCCCEEEEECCCEEEEEE IQENQGWKVWTREFTNLRIPMIFDLQVDPYEKADQGFGYDSWVFDHVFLLVPTQAKVAKM EECCCCCEEEEEHHCCEECCEEEEEECCCCHHHHCCCCCCHHHHCEEEEEECCHHHHHHH IESFKEFPPRQEIPSFSVDKVMEQMKNMEKVANASK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKIVKKTAIATGLALSGIQVAYAAAQPNILVIFGDDIGYGNISAYNQGMLGYQTPNIDS CCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH IANDGALFTSYYGQQSCTAGRSAFITGQMPVRTGLTKVGLPGAKQGLQAQDITLAQTLKD HCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHCCHHCCCCCHHCCCCCCCHHHHHHHHH QGYVTGQFGKNHLGDRDDMLPTNHGFDEFFGNLYHLNAEEEPENADYPKDPTFRKNFGPR CCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC GVIHSYADGKIEDTGPLTRKRMETVDEETMDAAMDFMTRAVKADKPFFTWYNATRMHIKT CCEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEE HVKAENSGKTGLGDYADGMVEHDNIVGDLLDKVDDLGISDNTVIIYTTDNGPMNATWPDA EEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC AFSPFRGEKNTGWEGGFRVPAVIKWPGHIKPGTKLNGMFAGEDWLPTLTAIAGNKDIKQE CCCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHCCCHHHHHH LLKGYKADNGKTYKNHLDGYNQVNYLTGKSKESARQEFFYWSDDGELLAMRDGRWKMHFK HHHHCCCCCCCCHHHHCCCCCCEEEECCCCHHHHHHHCEEECCCCCEEEEECCCEEEEEE IQENQGWKVWTREFTNLRIPMIFDLQVDPYEKADQGFGYDSWVFDHVFLLVPTQAKVAKM EECCCCCEEEEEHHCCEECCEEEEEECCCCHHHHCCCCCCHHHHCEEEEEECCHHHHHHH IESFKEFPPRQEIPSFSVDKVMEQMKNMEKVANASK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]