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The map label for this gene is 59712023

Identifier: 59712023

GI number: 59712023

Start: 1566928

End: 1567932

Strand: Reverse

Name: 59712023

Synonym: VF_1416

Alternate gene names: NA

Gene position: 1567932-1566928 (Counterclockwise)

Preceding gene: 59712024

Following gene: 59712021

Centisome position: 54.11

GC content: 36.92

Gene sequence:

>1005_bases
ATGAAAAAAATAGTCTGCATTAGTTTGTTATCCATATTGGGATTTTCTGCGTCTTCATTTGCTAGTGACAGTGTTCAGCA
AGCTCCGACAGTGAATCAAGCACAAAAGATGAGCCCTGAGCAAGAATTAGCGTATAGGGCTCAAAATAAAAATGAAACGA
TAGAAAATAGAGCAGATGCATTACGCCAATTAGCTCGATTTCCTAACCAAAACAGTTTGGTTGCGGTCGCTAGAGGGCTA
AAAGATCCAAATCCGGTTATCCGAGAAGCGGCAATTACAGGATCAGAGTTATACAAGTTATCTCATCGTTGGAGAATGAT
TTCACCGTTATTGAGTGATTCTGAAATGAGTGTTCGTCTCGCTGCTGGTATTAATTTAATGCGTGAATATCGTTCTATGA
CGGCAGAACAACAGGTTCAAATGGAACCTGTATATAAAGAGTTAGTTGATACTCTAACATCGCAAAATAGACAGGATACT
CAACTGCAATTAGCAGACATATACCGCTGGCATGGTGAGTGGACTAAAGCCGATGTTATTTATCAAAAATTAGTTAAATC
CGAACCTGAAAATGCAGAAGTATGGTTGAATTTATCAGATAATTTCCGTGGCCAAAATCAAGATGAACAAGCGCTAGTTA
CGCTAAATCAAGGTATAAAGCAATTACCTAAAGAACCGAGCTTATTTTATTCAAAAGCATTAACTCAAGTGCGTTTAAAT
CAAAAAGAAGACGCCGCTAAATCGATTCAGACAGCAGCAACATTAGCGGATAATAATAGTTATTATTGGTATTTGAATGG
TGTTTTACAAGAAAGTATTGATGTGAAATTAGCGACTGAATCGTTTGAAAAGGCGTATTTAATTTCTGGTTCGCCAGAGC
AGTTATATGCAGTATGTGATATTTATGTACGCTATGGAAATGAAAAAACAGATGCTTGTTTAGAAGAGCTAGCAAAGGTA
GCGCCTGAATATGTAATTGAACAATTAAAAGAGAAACGTAAGTAA

Upstream 100 bases:

>100_bases
CGAAGATGCAGCAAGTTCACCAAAATGCTTTTCCTACTAAGTTTTAATAATCTAAATTTTAATTATTTAATCTTTAAGAT
CGTACGTTTAAGAGTACCTT

Downstream 100 bases:

>100_bases
TAACAATTAATGTAAGTATTTGATTAAAAAAAAGTCGAACATATCTAATATGTTCGGCTTTTTTATTATTTTAGAATGGA
AAGTTAGTGCATGATTTGCA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: FOG TPR Repeat; Tetratricopeptide Repeat-Containing Protein; Cytochrome C Family Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKKIVCISLLSILGFSASSFASDSVQQAPTVNQAQKMSPEQELAYRAQNKNETIENRADALRQLARFPNQNSLVAVARGL
KDPNPVIREAAITGSELYKLSHRWRMISPLLSDSEMSVRLAAGINLMREYRSMTAEQQVQMEPVYKELVDTLTSQNRQDT
QLQLADIYRWHGEWTKADVIYQKLVKSEPENAEVWLNLSDNFRGQNQDEQALVTLNQGIKQLPKEPSLFYSKALTQVRLN
QKEDAAKSIQTAATLADNNSYYWYLNGVLQESIDVKLATESFEKAYLISGSPEQLYAVCDIYVRYGNEKTDACLEELAKV
APEYVIEQLKEKRK

Sequences:

>Translated_334_residues
MKKIVCISLLSILGFSASSFASDSVQQAPTVNQAQKMSPEQELAYRAQNKNETIENRADALRQLARFPNQNSLVAVARGL
KDPNPVIREAAITGSELYKLSHRWRMISPLLSDSEMSVRLAAGINLMREYRSMTAEQQVQMEPVYKELVDTLTSQNRQDT
QLQLADIYRWHGEWTKADVIYQKLVKSEPENAEVWLNLSDNFRGQNQDEQALVTLNQGIKQLPKEPSLFYSKALTQVRLN
QKEDAAKSIQTAATLADNNSYYWYLNGVLQESIDVKLATESFEKAYLISGSPEQLYAVCDIYVRYGNEKTDACLEELAKV
APEYVIEQLKEKRK
>Mature_334_residues
MKKIVCISLLSILGFSASSFASDSVQQAPTVNQAQKMSPEQELAYRAQNKNETIENRADALRQLARFPNQNSLVAVARGL
KDPNPVIREAAITGSELYKLSHRWRMISPLLSDSEMSVRLAAGINLMREYRSMTAEQQVQMEPVYKELVDTLTSQNRQDT
QLQLADIYRWHGEWTKADVIYQKLVKSEPENAEVWLNLSDNFRGQNQDEQALVTLNQGIKQLPKEPSLFYSKALTQVRLN
QKEDAAKSIQTAATLADNNSYYWYLNGVLQESIDVKLATESFEKAYLISGSPEQLYAVCDIYVRYGNEKTDACLEELAKV
APEYVIEQLKEKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37969; Mature: 37969

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVCISLLSILGFSASSFASDSVQQAPTVNQAQKMSPEQELAYRAQNKNETIENRADA
CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHH
LRQLARFPNQNSLVAVARGLKDPNPVIREAAITGSELYKLSHRWRMISPLLSDSEMSVRL
HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
AAGINLMREYRSMTAEQQVQMEPVYKELVDTLTSQNRQDTQLQLADIYRWHGEWTKADVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
YQKLVKSEPENAEVWLNLSDNFRGQNQDEQALVTLNQGIKQLPKEPSLFYSKALTQVRLN
HHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
QKEDAAKSIQTAATLADNNSYYWYLNGVLQESIDVKLATESFEKAYLISGSPEQLYAVCD
CHHHHHHHHHHHHHEECCCCEEEEEECHHHHCCCEEEEHHCCCCEEEECCCHHHHHHHHH
IYVRYGNEKTDACLEELAKVAPEYVIEQLKEKRK
HHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIVCISLLSILGFSASSFASDSVQQAPTVNQAQKMSPEQELAYRAQNKNETIENRADA
CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHH
LRQLARFPNQNSLVAVARGLKDPNPVIREAAITGSELYKLSHRWRMISPLLSDSEMSVRL
HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
AAGINLMREYRSMTAEQQVQMEPVYKELVDTLTSQNRQDTQLQLADIYRWHGEWTKADVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
YQKLVKSEPENAEVWLNLSDNFRGQNQDEQALVTLNQGIKQLPKEPSLFYSKALTQVRLN
HHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
QKEDAAKSIQTAATLADNNSYYWYLNGVLQESIDVKLATESFEKAYLISGSPEQLYAVCD
CHHHHHHHHHHHHHEECCCCEEEEEECHHHHCCCEEEEHHCCCCEEEECCCHHHHHHHHH
IYVRYGNEKTDACLEELAKVAPEYVIEQLKEKRK
HHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA