| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yniA [C]
Identifier: 59712020
GI number: 59712020
Start: 1563283
End: 1564149
Strand: Direct
Name: yniA [C]
Synonym: VF_1413
Alternate gene names: 59712020
Gene position: 1563283-1564149 (Clockwise)
Preceding gene: 59712018
Following gene: 172087708
Centisome position: 53.95
GC content: 37.14
Gene sequence:
>867_bases ATGTGGCAAGCTATTGCAAAACAAATCTCTGAAGTAACTCAACAACCTTTCAGTATCTCAGAACGTGAGAGTGTGAATGG TGGCGAAATAAATGACTGCTACATGATAAGTAATGGAAGTCAGCGTTATTTTGTCAAAATTAATGAAAAAGCAGAACTTC CTATATTTGAAACTGAAATAGAAAGCCTCACTCAACTTGATAAATCAGATCATATCTTTGTCCCCTCCCCAATCCATATA GGAACAACCAAAGAACATTCATTTTTAGTTCTTAATTACCTCCCAACCAAAAGTATGGATAAAGACGCTTTTTATGAATT AGGTGTCAGTCTTGCGAATCACCATCTATGGGGTGATCAACTCGAATACGGTTTTGACTGTGATAATTATCTTGGAAATG TATTACAAGTAAATACTTGGCACCGTCGTTGGGATTGTTTTTTTGCAGAGCAGCGCATTGGCTGGCAACTTCAACTACTC AAAGAAAAAGGGATGGTCCTTGGGGATATCGATACCCTAGTTAAAAATAGTAAATTAATTCTTCATAACCACCAACCCAA ACCGGCATTACTGCATGGTGATTTATGGCATGGCAATATTGCTTTAAGTGTTAAGGGACCAATAAGTTACGATCCCGCAT CTTATTGGGGAGATGCTGAATGTGATTTAGCAATGGTTGAACTGTTTGGAGGGATTCAAGACAGTTTCTTTGAAGGTTAT GAATCCATATCCTCTATTTCTGAAGGCTTTGAGACTCGTCAGCACTTATATAGCCTTTATCATGTATTAAATCATTGCAA TATGTTTGGTGGTGAATACATGTTCCATGCACAACAACTGATCGATAAGCTAAATTTAAATGAATGA
Upstream 100 bases:
>100_bases AGCTTTTCACATTGAGGTGTTTTTTAGTCTTACCTCACAGATATTTATCTCAAATATACTATGCTTAGTGTCTGTTTATC AGATATTGTGAGGTAATATT
Downstream 100 bases:
>100_bases CAATAGGTATTCACCTAGCAAATACAATGAGATGGTACTTGCCATCTCATTTTTTGTTTAATGTTAAACTCTTTGGCTTA AAACATCGCATCAATCAACT
Product: phosphotransferase/kinase
Products: phosphatidylethanolamine; CO2
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWQAIAKQISEVTQQPFSISERESVNGGEINDCYMISNGSQRYFVKINEKAELPIFETEIESLTQLDKSDHIFVPSPIHI GTTKEHSFLVLNYLPTKSMDKDAFYELGVSLANHHLWGDQLEYGFDCDNYLGNVLQVNTWHRRWDCFFAEQRIGWQLQLL KEKGMVLGDIDTLVKNSKLILHNHQPKPALLHGDLWHGNIALSVKGPISYDPASYWGDAECDLAMVELFGGIQDSFFEGY ESISSISEGFETRQHLYSLYHVLNHCNMFGGEYMFHAQQLIDKLNLNE
Sequences:
>Translated_288_residues MWQAIAKQISEVTQQPFSISERESVNGGEINDCYMISNGSQRYFVKINEKAELPIFETEIESLTQLDKSDHIFVPSPIHI GTTKEHSFLVLNYLPTKSMDKDAFYELGVSLANHHLWGDQLEYGFDCDNYLGNVLQVNTWHRRWDCFFAEQRIGWQLQLL KEKGMVLGDIDTLVKNSKLILHNHQPKPALLHGDLWHGNIALSVKGPISYDPASYWGDAECDLAMVELFGGIQDSFFEGY ESISSISEGFETRQHLYSLYHVLNHCNMFGGEYMFHAQQLIDKLNLNE >Mature_288_residues MWQAIAKQISEVTQQPFSISERESVNGGEINDCYMISNGSQRYFVKINEKAELPIFETEIESLTQLDKSDHIFVPSPIHI GTTKEHSFLVLNYLPTKSMDKDAFYELGVSLANHHLWGDQLEYGFDCDNYLGNVLQVNTWHRRWDCFFAEQRIGWQLQLL KEKGMVLGDIDTLVKNSKLILHNHQPKPALLHGDLWHGNIALSVKGPISYDPASYWGDAECDLAMVELFGGIQDSFFEGY ESISSISEGFETRQHLYSLYHVLNHCNMFGGEYMFHAQQLIDKLNLNE
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=280, Percent_Identity=34.2857142857143, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI11545906, Length=310, Percent_Identity=30.3225806451613, Blast_Score=129, Evalue=3e-30, Organism=Escherichia coli, GI1788019, Length=284, Percent_Identity=43.6619718309859, Blast_Score=261, Evalue=5e-71, Organism=Caenorhabditis elegans, GI212659227, Length=266, Percent_Identity=28.1954887218045, Blast_Score=93, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: 4.1.1.65
Molecular weight: Translated: 33057; Mature: 33057
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAIAKQISEVTQQPFSISERESVNGGEINDCYMISNGSQRYFVKINEKAELPIFETEI CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHH ESLTQLDKSDHIFVPSPIHIGTTKEHSFLVLNYLPTKSMDKDAFYELGVSLANHHLWGDQ HHHHHCCCCCEEECCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC LEYGFDCDNYLGNVLQVNTWHRRWDCFFAEQRIGWQLQLLKEKGMVLGDIDTLVKNSKLI CCCCCCHHHHHCCEEEEECCHHHHHEEEHHHHCCCEEEEHHHCCCEEECHHHHHCCCEEE LHNHQPKPALLHGDLWHGNIALSVKGPISYDPASYWGDAECDLAMVELFGGIQDSFFEGY EECCCCCCEEEECCEEECEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH ESISSISEGFETRQHLYSLYHVLNHCNMFGGEYMFHAQQLIDKLNLNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWQAIAKQISEVTQQPFSISERESVNGGEINDCYMISNGSQRYFVKINEKAELPIFETEI CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHH ESLTQLDKSDHIFVPSPIHIGTTKEHSFLVLNYLPTKSMDKDAFYELGVSLANHHLWGDQ HHHHHCCCCCEEECCCCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC LEYGFDCDNYLGNVLQVNTWHRRWDCFFAEQRIGWQLQLLKEKGMVLGDIDTLVKNSKLI CCCCCCHHHHHCCEEEEECCHHHHHEEEHHHHCCCEEEEHHHCCCEEECHHHHHCCCEEE LHNHQPKPALLHGDLWHGNIALSVKGPISYDPASYWGDAECDLAMVELFGGIQDSFFEGY EECCCCCCEEEECCEEECEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHH ESISSISEGFETRQHLYSLYHVLNHCNMFGGEYMFHAQQLIDKLNLNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphatidyl-L-serine
Specific reaction: phosphatidyl-L-serine = phosphatidylethanolamine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA