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The map label for this gene is 59712019

Identifier: 59712019

GI number: 59712019

Start: 1562691

End: 1563026

Strand: Reverse

Name: 59712019

Synonym: VF_1412

Alternate gene names: NA

Gene position: 1563026-1562691 (Counterclockwise)

Preceding gene: 59712021

Following gene: 59712017

Centisome position: 53.94

GC content: 35.42

Gene sequence:

>336_bases
ATGATTGTCAACACTGATGGATACCACGCATTAATTGAATATTTGACTGAACACCTTTCAATTTTTGCAAACCAACAAGG
TGATACAGGAGAAGAGACGGTTGAAGATATCGTTAATGATCTTGTTGCTTCAAATTTGATGGTCGTTTTTCAGCAAAATC
CTGAATTGGATCCTGATGTTAGATTTACACTGCTAAGAGAAGCCGATGCTGTTGTTGATGACTTAGGGGAAGTGTTAGCT
GGAGCATGGGTTCAAAAAGCGACAAATGAACAAGTAATGTTTTTAGATGATTATATTGGTCTAATTAAAAACTTATTTGA
TAGCGCATTTAAGTAA

Upstream 100 bases:

>100_bases
GATCTATCTGTCAAGCTTAATGGAAAGCGTTTGAGTGTCGATCTCAATTTTGATAAATTACTGGTTAGTTAATAATAAAT
TACAACTAAATGGACAGAAT

Downstream 100 bases:

>100_bases
TTCATATCATAAAGAACGAAAGATCGTGAAGCTAAGTGAAGTAGGGGTATTTCACTTAGCTTTTTTGTTTATAACACTCT
TCGAACTTGCCAGAATGCTT

Product: Type IIA topoisomerase, B subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIVNTDGYHALIEYLTEHLSIFANQQGDTGEETVEDIVNDLVASNLMVVFQQNPELDPDVRFTLLREADAVVDDLGEVLA
GAWVQKATNEQVMFLDDYIGLIKNLFDSAFK

Sequences:

>Translated_111_residues
MIVNTDGYHALIEYLTEHLSIFANQQGDTGEETVEDIVNDLVASNLMVVFQQNPELDPDVRFTLLREADAVVDDLGEVLA
GAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
>Mature_111_residues
MIVNTDGYHALIEYLTEHLSIFANQQGDTGEETVEDIVNDLVASNLMVVFQQNPELDPDVRFTLLREADAVVDDLGEVLA
GAWVQKATNEQVMFLDDYIGLIKNLFDSAFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12436; Mature: 12436

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNTDGYHALIEYLTEHLSIFANQQGDTGEETVEDIVNDLVASNLMVVFQQNPELDPDV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCH
RFTLLREADAVVDDLGEVLAGAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVNTDGYHALIEYLTEHLSIFANQQGDTGEETVEDIVNDLVASNLMVVFQQNPELDPDV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCH
RFTLLREADAVVDDLGEVLAGAWVQKATNEQVMFLDDYIGLIKNLFDSAFK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA