| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is modB2 [H]
Identifier: 59712010
GI number: 59712010
Start: 1553082
End: 1553780
Strand: Direct
Name: modB2 [H]
Synonym: VF_1403
Alternate gene names: 59712010
Gene position: 1553082-1553780 (Clockwise)
Preceding gene: 59712009
Following gene: 59712011
Centisome position: 53.6
GC content: 41.77
Gene sequence:
>699_bases ATGACTATTTTAGCCACCTCTCAAGAGGCAATTCAATTACTGTTTAGTGGTGATACTGCATTATGGAGCATCGTAGGTGT TTCATTTTCTGTATCCCTATTTGCAATGGCAGTTGTATTATTACCTGCTCTTTTGTTGGCATTTGCGCTTGCTTATGGAT CTTTTCCTGGGCGGTGGCTATTACTTTCTATTATGAATACATTGCAATCCGTGCCCACCGTTGTTATTGGGTTGCTACTG TATATGATGCTTTCTCGTGCTGGCCCATTAGGTGACTGGCAACTACTCTTTACCCAAGAAGCAATGGTTATTGGACAGAT ATTTATCTGTTTTCCAATTATGGTCGCTATGATGCATGGTGCATTTCAGCACAGTGACCGTCGTGTTTGGGAAACCTCAT TCACGCTTGGTGCTTCACTTCCACGCGCATTTGGCAGCTTAATTTGGGAGACTCGCTTCCCTATTTTAGCCGCTGTAATC GCTGGATTTTCTCGTATAATTACTGAAGTAGGTTGTTCAATGATGGTTGGTGGTAACATCTTCAACTCTACTCGAAATAT TCCAACTGCGATTGCAATGGAAAGCCAAAAAGGCGCATTTGCACAGGGTGTTGCTCTTGGTATGGTGTTATTAGTTTTAG CACTCGTTTTAAACTTTTTACTCTCTATCACTCGTGGTAAAGGGTATTTACGTACTTAG
Upstream 100 bases:
>100_bases AGCATTCAGTGATTGGTTAGTAAGCGATAAAGGTCAGGCAATGATTAATAGCTTCAAACTGAATGGTAAACAACTGTTCA CTGCGGACGCTAAATAATAC
Downstream 100 bases:
>100_bases TAGGCATATAACGATGACAATTAGAATAACTGCCGATAATCTATCTATGCGATTTAACGATCGTGTGCTTTTTCATATCC CTCATTTATCTCTTGGGCCA
Product: molybdate ABC transporter, permease ModB
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTILATSQEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALLLAFALAYGSFPGRWLLLSIMNTLQSVPTVVIGLLL YMMLSRAGPLGDWQLLFTQEAMVIGQIFICFPIMVAMMHGAFQHSDRRVWETSFTLGASLPRAFGSLIWETRFPILAAVI AGFSRIITEVGCSMMVGGNIFNSTRNIPTAIAMESQKGAFAQGVALGMVLLVLALVLNFLLSITRGKGYLRT
Sequences:
>Translated_232_residues MTILATSQEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALLLAFALAYGSFPGRWLLLSIMNTLQSVPTVVIGLLL YMMLSRAGPLGDWQLLFTQEAMVIGQIFICFPIMVAMMHGAFQHSDRRVWETSFTLGASLPRAFGSLIWETRFPILAAVI AGFSRIITEVGCSMMVGGNIFNSTRNIPTAIAMESQKGAFAQGVALGMVLLVLALVLNFLLSITRGKGYLRT >Mature_231_residues TILATSQEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALLLAFALAYGSFPGRWLLLSIMNTLQSVPTVVIGLLLY MMLSRAGPLGDWQLLFTQEAMVIGQIFICFPIMVAMMHGAFQHSDRRVWETSFTLGASLPRAFGSLIWETRFPILAAVIA GFSRIITEVGCSMMVGGNIFNSTRNIPTAIAMESQKGAFAQGVALGMVLLVLALVLNFLLSITRGKGYLRT
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=218, Percent_Identity=26.605504587156, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25117; Mature: 24986
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILATSQEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALLLAFALAYGSFPGRWL CEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLSIMNTLQSVPTVVIGLLLYMMLSRAGPLGDWQLLFTQEAMVIGQIFICFPIMVAMMHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQHSDRRVWETSFTLGASLPRAFGSLIWETRFPILAAVIAGFSRIITEVGCSMMVGGNI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCH FNSTRNIPTAIAMESQKGAFAQGVALGMVLLVLALVLNFLLSITRGKGYLRT HCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TILATSQEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALLLAFALAYGSFPGRWL EEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLSIMNTLQSVPTVVIGLLLYMMLSRAGPLGDWQLLFTQEAMVIGQIFICFPIMVAMMHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQHSDRRVWETSFTLGASLPRAFGSLIWETRFPILAAVIAGFSRIITEVGCSMMVGGNI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCH FNSTRNIPTAIAMESQKGAFAQGVALGMVLLVLALVLNFLLSITRGKGYLRT HCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]