| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711988
Identifier: 59711988
GI number: 59711988
Start: 1529281
End: 1529631
Strand: Reverse
Name: 59711988
Synonym: VF_1381
Alternate gene names: NA
Gene position: 1529631-1529281 (Counterclockwise)
Preceding gene: 59711989
Following gene: 59711987
Centisome position: 52.79
GC content: 38.18
Gene sequence:
>351_bases ATGGAAATGATAATTGTCTCTTCAGAAAGACAGAAACGGATGATCATGATTTTTAGCCGTATGAAAGCTAAAATGTCAGA TAAAGCACTTCTCAATAGCTTAGACTCACGCCAAGTTAATTCAACAGCATATCCTGCATTTAAAAAAGCACCAGATCTTC GTGTTGAACGAATTTATTTGCCATTTGGTGATGATAAAACAGGTTCATTAGATGGCGGTGACTTCTTATATCGTTACCTT TCTAAGGGATACATTTGTCTTGGTGATTTTGAAGGGCAGCCAAAACCTGATTTAACCCCATGGGGCGTGCGATCTGTTCG TCGTCAACCTAAGATTGGATTTGGTTTATAA
Upstream 100 bases:
>100_bases ATCGTTGCCTGATTCAGCAATTGACACCGGTTATGTAGAGTAAACATGGTTGTGAGAAGGGGTTTACTATATACTTTCTC GTTTCAAAGGAAATCCAATT
Downstream 100 bases:
>100_bases TATGAAAGCTAATGTAATTGATAAGTGAGTCAATTGCATAAAAGTGAATTGTAAATCGGAATTCCGACTCAAGTTATAAC ATTAAGATGTGGTGGGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEMIIVSSERQKRMIMIFSRMKAKMSDKALLNSLDSRQVNSTAYPAFKKAPDLRVERIYLPFGDDKTGSLDGGDFLYRYL SKGYICLGDFEGQPKPDLTPWGVRSVRRQPKIGFGL
Sequences:
>Translated_116_residues MEMIIVSSERQKRMIMIFSRMKAKMSDKALLNSLDSRQVNSTAYPAFKKAPDLRVERIYLPFGDDKTGSLDGGDFLYRYL SKGYICLGDFEGQPKPDLTPWGVRSVRRQPKIGFGL >Mature_116_residues MEMIIVSSERQKRMIMIFSRMKAKMSDKALLNSLDSRQVNSTAYPAFKKAPDLRVERIYLPFGDDKTGSLDGGDFLYRYL SKGYICLGDFEGQPKPDLTPWGVRSVRRQPKIGFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13243; Mature: 13243
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMIIVSSERQKRMIMIFSRMKAKMSDKALLNSLDSRQVNSTAYPAFKKAPDLRVERIYL CCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE PFGDDKTGSLDGGDFLYRYLSKGYICLGDFEGQPKPDLTPWGVRSVRRQPKIGFGL ECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MEMIIVSSERQKRMIMIFSRMKAKMSDKALLNSLDSRQVNSTAYPAFKKAPDLRVERIYL CCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE PFGDDKTGSLDGGDFLYRYLSKGYICLGDFEGQPKPDLTPWGVRSVRRQPKIGFGL ECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA