| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711968
Identifier: 59711968
GI number: 59711968
Start: 1506404
End: 1506601
Strand: Reverse
Name: 59711968
Synonym: VF_1361
Alternate gene names: NA
Gene position: 1506601-1506404 (Counterclockwise)
Preceding gene: 59711969
Following gene: 59711967
Centisome position: 52.0
GC content: 45.45
Gene sequence:
>198_bases ATGAGCGATAAAAAAACGGACCTAAACCGCCGTAACCTACTGAAAGGCCTTGCAACTGCTGCTGCCGCAGGTTCAGTAGC CGCAGCGGTATCTGGTACTGCAAATGCAAACACAGTAGCGGAAACTAAAAACGTTGAGAAAAAAGGCGATGGATATCGTG AAACTCAACACATTCGTGATTATTACGACAGCCTATAA
Upstream 100 bases:
>100_bases TACAGAAGTGCAATAGTACGTAAATCAATTCATTTAACTAGAATTAGAACCATAAAAACAAAAGCCCATTCCAAATACAT TGGAATCATAGGAGCATTGA
Downstream 100 bases:
>100_bases CGGAGCATAATAATGAAACTGACTAAACGTTCCGATTCGGTACAGAAGCAAGAGAACCAACTGGGCATTACACGTCGTAT GTTCATGCGTACTTCAACAA
Product: Tat pathway signal sequence domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSDKKTDLNRRNLLKGLATAAAAGSVAAAVSGTANANTVAETKNVEKKGDGYRETQHIRDYYDSL
Sequences:
>Translated_65_residues MSDKKTDLNRRNLLKGLATAAAAGSVAAAVSGTANANTVAETKNVEKKGDGYRETQHIRDYYDSL >Mature_64_residues SDKKTDLNRRNLLKGLATAAAAGSVAAAVSGTANANTVAETKNVEKKGDGYRETQHIRDYYDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6929; Mature: 6798
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKKTDLNRRNLLKGLATAAAAGSVAAAVSGTANANTVAETKNVEKKGDGYRETQHIRD CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH YYDSL HHHCC >Mature Secondary Structure SDKKTDLNRRNLLKGLATAAAAGSVAAAVSGTANANTVAETKNVEKKGDGYRETQHIRD CCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH YYDSL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA