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The map label for this gene is phnA [H]

Identifier: 59711954

GI number: 59711954

Start: 1489623

End: 1489958

Strand: Reverse

Name: phnA [H]

Synonym: VF_1347

Alternate gene names: 59711954

Gene position: 1489958-1489623 (Counterclockwise)

Preceding gene: 59711955

Following gene: 59711953

Centisome position: 51.42

GC content: 39.88

Gene sequence:

>336_bases
ATGTCTCTTCCTCCTTGCCCTGTATGTAACTCTGAATTTGTTTATCCAGATCAAAACCATCTTATCTGCCCTGAGTGTGC
TCATGAATGGAACCCTGAAGAAGCACTTATGGAAGAGAAGGTGATCGTCAAAGACGCTAACGGTACGTTGTTGGAAGAAG
GCGATAAGATAACGGTAGCTAAAGATTTAAAAGTTAAAGGCAGCTCTTTAGTGATTAAAGTGGGAACAAAAGCGATTATC
AAACGTATTGTTGATGGAAAAGATCATCAATTAGATTGTAAGGTTGATGGTGTTGGCGAAATGATGGTGACGGCTCAGTT
TGTAAAGAAAGCCTAA

Upstream 100 bases:

>100_bases
TTTTGTATTTGCGGTTTAATGATCTTCATGAAGGCATTTCATTCTTTATATAGACCTATTACTATATAGATTACGTTCAT
TAACTAAGAAGTAATCCAAT

Downstream 100 bases:

>100_bases
AGCCTAACTAATCAGGGATGAGGATAACCTAATGGATGGGAAAATTTATAAATGCGGACAGTGTCGTCAGTTTACTCGTA
CGCCAAATAATTCAAAGGAT

Product: alkylphosphonate utilization operon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSLPPCPVCNSEFVYPDQNHLICPECAHEWNPEEALMEEKVIVKDANGTLLEEGDKITVAKDLKVKGSSLVIKVGTKAII
KRIVDGKDHQLDCKVDGVGEMMVTAQFVKKA

Sequences:

>Translated_111_residues
MSLPPCPVCNSEFVYPDQNHLICPECAHEWNPEEALMEEKVIVKDANGTLLEEGDKITVAKDLKVKGSSLVIKVGTKAII
KRIVDGKDHQLDCKVDGVGEMMVTAQFVKKA
>Mature_110_residues
SLPPCPVCNSEFVYPDQNHLICPECAHEWNPEEALMEEKVIVKDANGTLLEEGDKITVAKDLKVKGSSLVIKVGTKAIIK
RIVDGKDHQLDCKVDGVGEMMVTAQFVKKA

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=57.6576576576577, Blast_Score=132, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12207; Mature: 12076

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPCPVCNSEFVYPDQNHLICPECAHEWNPEEALMEEKVIVKDANGTLLEEGDKITVA
CCCCCCCCCCCCCCCCCCCCEECHHHCCCCCCHHHHHCCEEEEECCCCCEEECCCEEEEE
KDLKVKGSSLVIKVGTKAIIKRIVDGKDHQLDCKVDGVGEMMVTAQFVKKA
ECCEECCCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLPPCPVCNSEFVYPDQNHLICPECAHEWNPEEALMEEKVIVKDANGTLLEEGDKITVA
CCCCCCCCCCCCCCCCCCCEECHHHCCCCCCHHHHHCCEEEEECCCCCEEECCCEEEEE
KDLKVKGSSLVIKVGTKAIIKRIVDGKDHQLDCKVDGVGEMMVTAQFVKKA
ECCEECCCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]