| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711953
Identifier: 59711953
GI number: 59711953
Start: 1489460
End: 1489591
Strand: Reverse
Name: 59711953
Synonym: VF_1346
Alternate gene names: NA
Gene position: 1489591-1489460 (Counterclockwise)
Preceding gene: 59711954
Following gene: 59711952
Centisome position: 51.41
GC content: 40.15
Gene sequence:
>132_bases ATGGATGGGAAAATTTATAAATGCGGACAGTGTCGTCAGTTTACTCGTACGCCAAATAATTCAAAGGATTTATGCGGTGC TTGGGATCAACCAACAATGGCAAACCGTGTTGCGTGTGATTTTTTATGTTGA
Upstream 100 bases:
>100_bases CAATTAGATTGTAAGGTTGATGGTGTTGGCGAAATGATGGTGACGGCTCAGTTTGTAAAGAAAGCCTAAAGCCTAACTAA TCAGGGATGAGGATAACCTA
Downstream 100 bases:
>100_bases AATCTCTTAAAGAGAGTAAGACCAATGGAAGGTAACTCACCATGTTTACGTTAAAAGTGGATAACGAATTAAATCTAGCC CTCATTGAACCTTCTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 43
Protein sequence:
>43_residues MDGKIYKCGQCRQFTRTPNNSKDLCGAWDQPTMANRVACDFLC
Sequences:
>Translated_43_residues MDGKIYKCGQCRQFTRTPNNSKDLCGAWDQPTMANRVACDFLC >Mature_43_residues MDGKIYKCGQCRQFTRTPNNSKDLCGAWDQPTMANRVACDFLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4888; Mature: 4888
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 16.3 %Cys+Met (Translated Protein) 11.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 16.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKIYKCGQCRQFTRTPNNSKDLCGAWDQPTMANRVACDFLC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure MDGKIYKCGQCRQFTRTPNNSKDLCGAWDQPTMANRVACDFLC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA