| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ygiN [C]
Identifier: 59711930
GI number: 59711930
Start: 1471944
End: 1472234
Strand: Reverse
Name: ygiN [C]
Synonym: VF_1323
Alternate gene names: 59711930
Gene position: 1472234-1471944 (Counterclockwise)
Preceding gene: 59711931
Following gene: 59711927
Centisome position: 50.81
GC content: 33.68
Gene sequence:
>291_bases ATGACTAAGATATTAACGATTGTTGCAAGAATTGAAGCAAAAAATGGTAATGCTGAATTTGTAAAAGAAGCAATGCTTAA GTTACTGGAGCCTACACGTAAAGAAGTAGGGTGTATTCAGTATGATCTTCACCAAGATAATGAGAATCCAAATGTATTTG TATTTCATGAACAATGGGAAAGCGAAGCGCATTTACAAGATCATTTAAACACTGTTCATATTGCTGAGTACGTAAAAACA GTTGATGGAGCTATTGACTCATTTGTTCTAAATCGAATGACTAAGCTGTAA
Upstream 100 bases:
>100_bases CAAGAGCAATTGTTAGAACCGTTAGGATTGATTGTACTTCCTGAATAAAGACGTGTTTTAATAGTTATTCAAAGCTTTTT AAATAGAATGAATTTATACA
Downstream 100 bases:
>100_bases TTACGTTCTTCATTAACGAAAAAAGCCACTTATGATTACTCACAAGTGGCTTTTTATTGTCTTACTTACTATTAGAAAGA CAGGAAGATGCCTGCAACGG
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Antibiotic Biosynthesis Monooxygenase Domain Protein
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTKILTIVARIEAKNGNAEFVKEAMLKLLEPTRKEVGCIQYDLHQDNENPNVFVFHEQWESEAHLQDHLNTVHIAEYVKT VDGAIDSFVLNRMTKL
Sequences:
>Translated_96_residues MTKILTIVARIEAKNGNAEFVKEAMLKLLEPTRKEVGCIQYDLHQDNENPNVFVFHEQWESEAHLQDHLNTVHIAEYVKT VDGAIDSFVLNRMTKL >Mature_95_residues TKILTIVARIEAKNGNAEFVKEAMLKLLEPTRKEVGCIQYDLHQDNENPNVFVFHEQWESEAHLQDHLNTVHIAEYVKTV DGAIDSFVLNRMTKL
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11079; Mature: 10948
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILTIVARIEAKNGNAEFVKEAMLKLLEPTRKEVGCIQYDLHQDNENPNVFVFHEQWE CCHHHEEHHHHCCCCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCEEEEECCCC SEAHLQDHLNTVHIAEYVKTVDGAIDSFVLNRMTKL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKILTIVARIEAKNGNAEFVKEAMLKLLEPTRKEVGCIQYDLHQDNENPNVFVFHEQWE CHHHEEHHHHCCCCCCHHHHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCEEEEECCCC SEAHLQDHLNTVHIAEYVKTVDGAIDSFVLNRMTKL CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA