Click here to switch to the map view.

The map label for this gene is ccoS

Identifier: 59711913

GI number: 59711913

Start: 1456974

End: 1457150

Strand: Direct

Name: ccoS

Synonym: VF_1306

Alternate gene names: NA

Gene position: 1456974-1457150 (Clockwise)

Preceding gene: 172087697

Following gene: 59711914

Centisome position: 50.28

GC content: 36.16

Gene sequence:

>177_bases
ATGGCTAGTTTATATTTATTAATCCCTATCGCGATCATGCTGGTTTGCGTCGCTGTCGCTATTTTCATCTGGGCAGTAAA
AAGCGATCAATTTGAAGATTTAGATAGACAAGGTTCCGAAATCCTTTTTGATGAAGAGACGAAAGCCTCAGTAAAAGATA
AAAAAAATGAACATTGA

Upstream 100 bases:

>100_bases
CTTGCTGTTATGGGATTAGTTGCACCATATATTGCCGTTATCGGAATGTCTGGGAGCTCTATTATTGTAGTAACTAACTC
ATTGAGGTTATTAAAAGAAA

Downstream 100 bases:

>100_bases
TTTTGTTGCTGCATTTTTTGTGGGCTTAATGGGTGCTGGGCACTGCATAGGTATGTGCGGCGGGATCTCTGCAGTAATTT
CCATGAACGCTTCTACTAGC

Product: cytochrome oxidase maturation protein, cbb3-type

Products: NA

Alternate protein names: Cytochrome Oxidase Maturation Protein; FixS-Like Protein

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MASLYLLIPIAIMLVCVAVAIFIWAVKSDQFEDLDRQGSEILFDEETKASVKDKKNEH

Sequences:

>Translated_58_residues
MASLYLLIPIAIMLVCVAVAIFIWAVKSDQFEDLDRQGSEILFDEETKASVKDKKNEH
>Mature_57_residues
ASLYLLIPIAIMLVCVAVAIFIWAVKSDQFEDLDRQGSEILFDEETKASVKDKKNEH

Specific function: Unknown

COG id: COG3197

COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6584; Mature: 6453

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLYLLIPIAIMLVCVAVAIFIWAVKSDQFEDLDRQGSEILFDEETKASVKDKKNEH
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCHHHCCCCCCC
>Mature Secondary Structure 
ASLYLLIPIAIMLVCVAVAIFIWAVKSDQFEDLDRQGSEILFDEETKASVKDKKNEH
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA