The gene/protein map for NC_006840 is currently unavailable.
Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is 59711878

Identifier: 59711878

GI number: 59711878

Start: 1411214

End: 1412095

Strand: Direct

Name: 59711878

Synonym: VF_1271

Alternate gene names: NA

Gene position: 1411214-1412095 (Clockwise)

Preceding gene: 59711872

Following gene: 59711879

Centisome position: 48.7

GC content: 39.91

Gene sequence:

>882_bases
ATGACAGTTTTATTATTCTTACAGATCGGTCTTGTTATTGGAGGCCTAACGTTCCTTTTTATGCTTGTATCACTATGGCT
TAAGAAAAAGGACTCAGAAAAAGACACTAATATATGGGCAGTTGGTCTAATTGGTGGTTTTGCAAACTTTTGTGACACTC
TTGGTGTTGGAAGTTTTGCCATTAAAACGGCTGGTTATAAGCAGTTTAATTTAATCGATGACAAAGTATTACCTGGTACC
TTGAATGCTCAAGCAACCATGGCAACGGTTTTTCAAGCATTGATTTTTCTTACCGCTGTTAATGTGGATTTAACGACGCT
ACTTAGCCTAATTATTGCAGCGTGTGTTGGCGCAACAGTTGGTGCTCGATTAGTATCAAATTTTGATCGCCAATTGATTC
GTTTGATTATGGCTGGCGCTTTGCTGGTTGTTGCATTACTGATGTTTGCAGGACGTTTAGATTTATTCCCACTAGGTGGT
GAAGAGTTAGGATTAAGTGGTGAAAAATTGGTTATCGGTATTATTGGTAACTTTATTTTTGGTGCATTAATGACGGTAGG
GATTGGTTTATACGCACCGTGTATGACGATGATTTACTTGTTAGGTATGAACCCGTTAGCGGCATTTCCTATTATGATGT
GTTCATGCGCATTTTTATGTTTCTTTTCTGCTGGCGGTTTTATCAAGCAGAAAGCCGTGAACTCAAGAGCATCTTTGGTG
GTGGCGATTACCGGACCTATTGGCGTGCTAATTGCGGCGTTCATTGTTAAATCTCTTGATGTCGATATGCTTGCTTGGTT
AGTGGCGTTTGTGGTTCTTTATACTGCAGTTATGATGTTACGTTCATGGCAGCAAGGCCGAGTGACAAATAAAGCGCTAT
AA

Upstream 100 bases:

>100_bases
AAGGGAATGGAGTAAGCCTTTACCACATAAGGGCTGCACTGGTTTTTCTTATTAATCTGAATTACTATTCTCAGCTTTGT
TTCAACTGTGTGATGTATTG

Downstream 100 bases:

>100_bases
AATGCGAGTTTCTGTCACATAGTTATTGGAGATATAAAAAGTTCGTGGTATTTTCCACCTACCAATTATTTATGGATTTT
TTATCATGCCAAAGGCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTVLLFLQIGLVIGGLTFLFMLVSLWLKKKDSEKDTNIWAVGLIGGFANFCDTLGVGSFAIKTAGYKQFNLIDDKVLPGT
LNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALLVVALLMFAGRLDLFPLGG
EELGLSGEKLVIGIIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
VAITGPIGVLIAAFIVKSLDVDMLAWLVAFVVLYTAVMMLRSWQQGRVTNKAL

Sequences:

>Translated_293_residues
MTVLLFLQIGLVIGGLTFLFMLVSLWLKKKDSEKDTNIWAVGLIGGFANFCDTLGVGSFAIKTAGYKQFNLIDDKVLPGT
LNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALLVVALLMFAGRLDLFPLGG
EELGLSGEKLVIGIIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
VAITGPIGVLIAAFIVKSLDVDMLAWLVAFVVLYTAVMMLRSWQQGRVTNKAL
>Mature_292_residues
TVLLFLQIGLVIGGLTFLFMLVSLWLKKKDSEKDTNIWAVGLIGGFANFCDTLGVGSFAIKTAGYKQFNLIDDKVLPGTL
NAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATVGARLVSNFDRQLIRLIMAGALLVVALLMFAGRLDLFPLGGE
ELGLSGEKLVIGIIGNFIFGALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLVV
AITGPIGVLIAAFIVKSLDVDMLAWLVAFVVLYTAVMMLRSWQQGRVTNKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31300; Mature: 31169

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLFLQIGLVIGGLTFLFMLVSLWLKKKDSEKDTNIWAVGLIGGFANFCDTLGVGSFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHH
IKTAGYKQFNLIDDKVLPGTLNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATV
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GARLVSNFDRQLIRLIMAGALLVVALLMFAGRLDLFPLGGEELGLSGEKLVIGIIGNFIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCHHHHHHHHHHHH
GALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEE
VAITGPIGVLIAAFIVKSLDVDMLAWLVAFVVLYTAVMMLRSWQQGRVTNKAL
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TVLLFLQIGLVIGGLTFLFMLVSLWLKKKDSEKDTNIWAVGLIGGFANFCDTLGVGSFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHH
IKTAGYKQFNLIDDKVLPGTLNAQATMATVFQALIFLTAVNVDLTTLLSLIIAACVGATV
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GARLVSNFDRQLIRLIMAGALLVVALLMFAGRLDLFPLGGEELGLSGEKLVIGIIGNFIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCHHHHHHHHHHHH
GALMTVGIGLYAPCMTMIYLLGMNPLAAFPIMMCSCAFLCFFSAGGFIKQKAVNSRASLV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEE
VAITGPIGVLIAAFIVKSLDVDMLAWLVAFVVLYTAVMMLRSWQQGRVTNKAL
EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA