| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pphA [H]
Identifier: 59711856
GI number: 59711856
Start: 1389615
End: 1390529
Strand: Direct
Name: pphA [H]
Synonym: VF_1249
Alternate gene names: 59711856
Gene position: 1389615-1390529 (Clockwise)
Preceding gene: 59711854
Following gene: 59711857
Centisome position: 47.96
GC content: 32.9
Gene sequence:
>915_bases ATGAAAAATAATGACATAAAACTATCGATTCCTAACATTAGACGTTCAAGATTAATAAATGTAATAAAATCGCATGGTTG CATCAGAATATTAGAAACTCATAATCCAATCTCAGCACTTATAGCAGAGAAAGCCAGTGCTAATGATATTGATTCTGAAG AGAATGTTGAATATCAAGGTTTTTGGTCAAGTTCATTAACTGATTCGGTAAGTCAAGGTAAGCCAGATATTGAGTTGCTT GACATTAAGAACAGAATCTCAAATATAAGCGATATATTTGAGGTAACTTCCAAACCTCTAATTATAGATGGTGATACTGG AGGGAAAATTGAACATTTATCATTCAACATAAGGTCTCTTGAGCGACTTGGCGTGTCAGCAATTATAATTGAAGATAAAA CAGGGCTTAAGAAAAACTCATTATTAGGTAATGAGGTTGAACAGAAGCAAGATACAATAGAATCATTCTGCACAAAAATA AAAAAAGGTAAAGAATCTCAATTAACAGAAGAATTTATGATTATTGCAAGGGTTGAAAGCTTAATTCTAGATGCTGGAAT GGAGGATGCATTAGAAAGAGCTTTTGCTTATAGTGAAAGTGGTGCTGACGGAATAATGATCCACAGTCGACACCAAGATG GAAAGGAAATATTTGATTTTGCGAAACAATATAGATCTAAGTATCCAGATAAGATATTAGTATGCGTACCTACTAGTTAC AATGAAATAAAATTCGATGAACTTAAACAAGCTGGCTTCAATATTGTTATTTATGCAAATCACATGCTAAGAGCAGCATA TAAGGCTATGGAATATACATCTGAGCAAATACTTAAAAATGGAAGAACATCTGAAATAGAATCTCACTTTCTATCAATAA AAAGAATGCTAGATCTCGTGCCTGGAACTCGGTAA
Upstream 100 bases:
>100_bases ATTATTACAATACTATAAAAGTGTGTTATTTATCACTGAAAATAAGTGTTAAGTGCGAAACTATTATTTAACAAATAATG AAAGTAGAGATGAATAGTGA
Downstream 100 bases:
>100_bases TGCTTATGTCTATATTTATATTAACATTAATGATTTTATCTCTAATATATAAGAGAAAATACATACCTTTGATTTTTATA TTGTTAGGGATTGTTGTTTC
Product: phosphoenolpyruvate phosphomutase
Products: NA
Alternate protein names: PPH [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKNNDIKLSIPNIRRSRLINVIKSHGCIRILETHNPISALIAEKASANDIDSEENVEYQGFWSSSLTDSVSQGKPDIELL DIKNRISNISDIFEVTSKPLIIDGDTGGKIEHLSFNIRSLERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKI KKGKESQLTEEFMIIARVESLILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSY NEIKFDELKQAGFNIVIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLVPGTR
Sequences:
>Translated_304_residues MKNNDIKLSIPNIRRSRLINVIKSHGCIRILETHNPISALIAEKASANDIDSEENVEYQGFWSSSLTDSVSQGKPDIELL DIKNRISNISDIFEVTSKPLIIDGDTGGKIEHLSFNIRSLERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKI KKGKESQLTEEFMIIARVESLILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSY NEIKFDELKQAGFNIVIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLVPGTR >Mature_304_residues MKNNDIKLSIPNIRRSRLINVIKSHGCIRILETHNPISALIAEKASANDIDSEENVEYQGFWSSSLTDSVSQGKPDIELL DIKNRISNISDIFEVTSKPLIIDGDTGGKIEHLSFNIRSLERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKI KKGKESQLTEEFMIIARVESLILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSY NEIKFDELKQAGFNIVIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLVPGTR
Specific function: Hydrolyzes phosphonopyruvate. Not active towards phosphoenolpyruvate, glycerophosphate, phospho-L-serine or phosphoglycolic acid [H]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isocitrate lyase/PEP mutase superfamily. PEP mutase family [H]
Homologues:
Organism=Escherichia coli, GI1786525, Length=263, Percent_Identity=24.3346007604563, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000918 - InterPro: IPR012649 - InterPro: IPR015813 [H]
Pfam domain/function: PF00463 ICL [H]
EC number: =3.11.1.3 [H]
Molecular weight: Translated: 34306; Mature: 34306
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNDIKLSIPNIRRSRLINVIKSHGCIRILETHNPISALIAEKASANDIDSEENVEYQG CCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEE FWSSSLTDSVSQGKPDIELLDIKNRISNISDIFEVTSKPLIIDGDTGGKIEHLSFNIRSL EECCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECHHHH ERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKIKKGKESQLTEEFMIIARVES HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSY HHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC NEIKFDELKQAGFNIVIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLV CCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC PGTR CCCC >Mature Secondary Structure MKNNDIKLSIPNIRRSRLINVIKSHGCIRILETHNPISALIAEKASANDIDSEENVEYQG CCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEEEE FWSSSLTDSVSQGKPDIELLDIKNRISNISDIFEVTSKPLIIDGDTGGKIEHLSFNIRSL EECCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECHHHH ERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKIKKGKESQLTEEFMIIARVES HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSY HHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC NEIKFDELKQAGFNIVIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLV CCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC PGTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12697754 [H]