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The map label for this gene is vdlD [H]

Identifier: 59711776

GI number: 59711776

Start: 1299457

End: 1299942

Strand: Direct

Name: vdlD [H]

Synonym: VF_1169

Alternate gene names: 59711776

Gene position: 1299457-1299942 (Clockwise)

Preceding gene: 59711775

Following gene: 59711777

Centisome position: 44.85

GC content: 44.65

Gene sequence:

>486_bases
ATGGGTAAAACAAAACGTGAAGTAACGTTACGCTTTTTAGCTGAGCCGGGCGATGTAAACTTTGGTGGTAAGGTACACGG
CGGTGCGGTAATGAAATGGATCGACCTCGCGGCTTATGCATCAGCGGCGGGTTGGAGTGGGAAATATTGCATTACCGCAT
ATGCCGGTGGCATTCGTTTTGTTGAGCCTATTTTTGTTGGCAACCTTGTGGAAGTGACAGGTAAAGTCATCTATACCGGA
AAATCGTCTATGCACATCGCTATTGATGTGCAAGCAAGTGACCCTAAAGAGCAGAATAATCGCTTAACGACGCACTGTAT
CGTTATCATGGTGGCGGTTGATGGAAATGGTAAACCGACATCAGTTCCTGAGTGGGTACCAGAGACAGAAGAAGACATAA
AATTAAGGGATTCGGCTATCAAACTGATGAATATGCGTAAAGAGATAGGCGAAGAGATGGAAGCACATGTTCAATACTTA
AAATAG

Upstream 100 bases:

>100_bases
TAAAAGTCACCAAACGTAGCGGATTAGGCGTGAGTGAGCTAGAAAAACAATATAAAAAAGTCAGTTAATTTTGCAAATAG
AGCAGTAAAAGGAATTTATA

Downstream 100 bases:

>100_bases
AGTAAAATTTCCTATTGTTTTTTCTATGCGCAATATAATTTTAAAATGTATGTTTTAGCCTGAATTATATTGCGCATGCC
TTCTAAATGACGCTGATATA

Product: acyl-CoA hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGKTKREVTLRFLAEPGDVNFGGKVHGGAVMKWIDLAAYASAAGWSGKYCITAYAGGIRFVEPIFVGNLVEVTGKVIYTG
KSSMHIAIDVQASDPKEQNNRLTTHCIVIMVAVDGNGKPTSVPEWVPETEEDIKLRDSAIKLMNMRKEIGEEMEAHVQYL
K

Sequences:

>Translated_161_residues
MGKTKREVTLRFLAEPGDVNFGGKVHGGAVMKWIDLAAYASAAGWSGKYCITAYAGGIRFVEPIFVGNLVEVTGKVIYTG
KSSMHIAIDVQASDPKEQNNRLTTHCIVIMVAVDGNGKPTSVPEWVPETEEDIKLRDSAIKLMNMRKEIGEEMEAHVQYL
K
>Mature_160_residues
GKTKREVTLRFLAEPGDVNFGGKVHGGAVMKWIDLAAYASAAGWSGKYCITAYAGGIRFVEPIFVGNLVEVTGKVIYTGK
SSMHIAIDVQASDPKEQNNRLTTHCIVIMVAVDGNGKPTSVPEWVPETEEDIKLRDSAIKLMNMRKEIGEEMEAHVQYLK

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17671; Mature: 17539

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTKREVTLRFLAEPGDVNFGGKVHGGAVMKWIDLAAYASAAGWSGKYCITAYAGGIRF
CCCCCCEEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEE
VEPIFVGNLVEVTGKVIYTGKSSMHIAIDVQASDPKEQNNRLTTHCIVIMVAVDGNGKPT
ECHHHHCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCC
SVPEWVPETEEDIKLRDSAIKLMNMRKEIGEEMEAHVQYLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKTKREVTLRFLAEPGDVNFGGKVHGGAVMKWIDLAAYASAAGWSGKYCITAYAGGIRF
CCCCCEEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEE
VEPIFVGNLVEVTGKVIYTGKSSMHIAIDVQASDPKEQNNRLTTHCIVIMVAVDGNGKPT
ECHHHHCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCC
SVPEWVPETEEDIKLRDSAIKLMNMRKEIGEEMEAHVQYLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]